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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4czwA_

Fold library idPDB HeaderMoleculeTitle
c4czwA_PDB header: gene regulationChain: A: PDB Molecule: pab-dependent poly(a)-specific ribonuclease subunit pan2;PDBTitle: structure of the neurospora crassa pan2 catalytic unit (protease and2 nuclease domain)


Added to library: Sat Jun 7 08:30:33 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DHWSLRPEAPPEYRICEIKYSKFGVDDFDFGFFNNTPYPGLENNITNSYANSLLQVXHYTPLLRNXALQH
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Known secondary structure (DSSP)

GGGSSS

TTTS






SS
GGGS
GGGTB
SSS



STTGGGT
 .........80.........90.........100.........110.........120.........130.........140
Sequence AATACLADPCLLCELGYVFDXLQKGEGPSCHATNXLRALNHTSNASVSGVLEDIAKDKNPSTLVKNLTXF
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Known secondary structure (DSSP) TS



SS


SS

TTSTTSTTTT

TTT
S


 .........150.........160.........170.........180.........190.........200.........210
Sequence LFDKISQDYKGTPPISTELERTLFKLNQPPNPLDLVKRLLETDARYQIKCXHCQHVSPRTATTFVNKLCY
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Known secondary structure (DSSP) TTS

S

TT
SS




TTT



SS


 .........220.........230.........240.........250.........260.........270.........280
Sequence PAQRITFSQVLKAGLENEAVNKGYCTKCQRYQNLDQRKIIFNIPAVLALCTEITTAEHRKLWSTPGWLPE
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Known secondary structure (DSSP)







TTTT

S



STSTT
S
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence EIGIIVDQGHVYCYEGDDLKLHLNRHNITVYSLVGTVVNVETKSPQKSHLVATVNVGRAEPESKDQDRWH
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Known secondary structure (DSSP) TB



TTTTTTTTS


S



 .........360.........370.........380.........390.........400.........410.........420
Sequence LFNDFSVRGISKVEALTFNAAWKXPVVVXFQVKAANHRFNXDWKTRLDTSVLFRDNNPHALKTYELLDRE
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Known secondary structure (DSSP) TT

T

BTTTGGGTT



T








S

S




TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence TEIPGPDTVIAIDTEFIRLKISHAIARASVVRGQGSREGVAFIDDYIHIKETIVDYLTEWSGITPTDLDP
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Known secondary structure (DSSP) T



TT



SSTTTT



S






T
 .........500.........510.........520.........530.........540.........550.........560
Sequence INSQRNLVSPKTAYKKLWVLVNLGCKFLGHGLSQDFRVINIQVPRNQVIDTSIIFXKPPSQRKISLAFLA
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Known secondary structure (DSSP) TT

S
TT
SST



GGGT

TTT




 .........570.........580.........590.........600.........
Sequence WYLLKEDIQQNTHDSIEDAQTALKLYRKYEEFXANGSFHDVLEALYKKG
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Known secondary structure (DSSP) S


TTSSS

TT
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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