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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4czvB_

Fold library idPDB HeaderMoleculeTitle
c4czvB_PDB header: gene regulationChain: B: PDB Molecule: pab-dependent poly(a)-specific ribonuclease subunit pan2;PDBTitle: structure of the neurospora crassa pan2 wd40 domain


Added to library: Sat Jun 7 08:54:38 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PHMMDSRDWTQLGCVAYPSPIHPDYHAGPASTIAFDNQDELLWIGTQKGFAGSFIGRELKRFTAFRIHPE
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Known secondary structure (DSSP)


TTT
TT
TTSTTGGG
S
S
SSTT
TT
TTTT
S
G
 .........80.........90.........100.........110.........120.........130.........140
Sequence TDGPLRQFLFVDKGVIFLGSRSVYMAARSGVPIWSIRHESMQDLRAMSFTSKGTSEILVAGWQNKMLVID
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Known secondary structure (DSSP) GG




SS
TT
TTS


TT
SS
SSTTSSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VNKGEVVKELPTQDQYSFLKMSRYICAATNKGTVNILDPITFTIKKQWQAHGAFINDLDTSNDFIVTCGG
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Known secondary structure (DSSP) TTTT
SS
SSSSSS
TTT


SSS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SHRQTHNTPAILDPYVKVFDLKNMSAMNPVPFAPLAAHVRMHPRMLTTAIVVNQAGQIHVTDLLNPSNSQ
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Known secondary structure (DSSP)


SSS


STTTT



TT



SSSTT
TT
TT
 .........290.........300.........310.........320....
Sequence VCYTQPQGVVLHFDVSRTGEGKALADNKHNTYVWGSPNKIQFTE
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Known secondary structure (DSSP)


SS

TTS

TTS
SS


S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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