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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4cvuA_

Fold library idPDB HeaderMoleculeTitle
c4cvuA_PDB header: hydrolaseChain: A: PDB Molecule: beta-mannosidase;PDBTitle: structure of fungal beta-mannosidase from glycoside2 hydrolase family 2 of trichoderma hazianum


Added to library: Sat Jul 12 08:34:21 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GKASIHDLALQKWTVTNEYGNITVPGKFPSQAHLDLHAAGVIGESNNGLNDFDLRWIAAQNWTYTSKPIS
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Known secondary structure (DSSP)


GGGS

SSS


SS

TTSS

TTSTTTTS




 .........80.........90.........100.........110.........120.........130.........140
Sequence GLSKHSDIATWLVFDGLDTYATVKFCDHIVGTPDNQFRQWFYDVSSALASCKSDPVLSINFGSVPRIINA
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Known secondary structure (DSSP)




TTS

BSSTT



TT



SSS



 .........150.........160.........170.........180.........190.........200.........210
Sequence INASDEVQHWPASVVYPFEYPNRQWVRKEQNDFGWDWGPAFSPVGPWQPGRIVQLSKGGELYSLNTDIDI
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Known secondary structure (DSSP)
TTS



TTTS

SSSS
GGGS
S
GGGG
BTTB





B

S
TTS

 .........220.........230.........240.........250.........260.........270.........280
Sequence FRKGQFNNFAPDQTAPWVVNASLDFLGTLPKHASMSVIITDASVLYSGKLEGVTQSDMTVTGSVTIDAHK
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Known secondary structure (DSSP) TT

TTS


TTS
S


SS



SS
TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence PKLWWPRDMGNQQLYNITVSVSSAGSKTPILVSQRRVGFRTILFSSGNITDAQIASGITPGNNWHFEING
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Known secondary structure (DSSP) S

B

TTSS
B

TT
SS
S




SB

T

SBB

TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence HEFYAKGANLIPPDAFWPRVTSDRMNRLFDSVESQNFNMLRVWSSGTYLPDWIYDIADERGVLLWSEFQF
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Known secondary structure (DSSP)



S
SSGGG

TT
S
TTS



T

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence SDTLYPDSDDFKANVVGEITYNVRRLNHHASLACWMGGNEFENLMLPIAQGADPATYPYVLGQYENLFIT
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Known secondary structure (DSSP) BSS




TT
TTS
BSTTTT
TTTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence TLFNVLAANSHSISYSPCSANNGWLEIDLDLPVPIVERYYNTTSGHIYGDTDFYNYDTSVSFDTSAYPVG
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Known secondary structure (DSSP)
SS

SSSS
S

TTSSSS
TT


TT
B
S




TTSTT
GGGS


 .........570.........580.........590.........600.........610.........620.........630
Sequence RFANEFGFISMPSIQTWQQAVDPEELSFNSTTVILRNHHYPAGGLTRNIHNSTLGQVEMTLAVERYYPTP
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Known secondary structure (DSSP) S



B


S
GGG
STT


SS

SSSS

S


 .........640.........650.........660.........670.........680.........690.........700
Sequence DKTDPVANFSSWCHATQLFQADMYKSEIQFYRRGSGLPERQLGSLYWQLNDIWQAPTWAGLEYDGRWKVL
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Known secondary structure (DSSP)

SSGGGSTT


S
SB
SSSSSBS
SB
TTS
B
S
 .........710.........720.........730.........740.........750.........760.........770
Sequence PYVSRRTYEHVIASAFWNYTANELEIWVTSDLWEPVAGEVSLTWVDLKGKPIANNAGMTKSTKFNVGAIN
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Known secondary structure (DSSP) TSSTTTT
SSS

TTS
B
GGGGGS
S
TT
 .........780.........790.........800.........810.........820.........830.........840
Sequence TTQIITANIQSDLKIPDTSDAVLVIELTAHGKLPNAASSKTTTFTHHNHFLPVWPNQAKVSDPKLHLSYN
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Known secondary structure (DSSP) TTTT


S
GGG


TT
SSSS

SS
GGG






 .........850.........860.........870.........880.........890.........900.........910
Sequence KSTKKFTVEATAGVSLYTWLTHPAGVLGFFDDNAFVLRPGEKKEVGFTLQQDTTGGKWTEQVTVESLWDL
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Known secondary structure (DSSP) TTTTSSS


TTS

S
TT
SSTTGGGGG

GGGG
 ...
Sequence TTP
Predicted secondary structure


SS confidence


Known secondary structure (DSSP) G


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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