Fold library entry viewer: c4cucA_

Added to library: Sat Aug 23 08:35:53 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	V	T	N	E	E	V	N	Q	M	I	E	D	R	K	V	D	F	N	Q	N	W	Y	F	K	L	N	A	N	S	K	E	A	I	K	P	D	A	D	V	S	T	W	K	K	L	D	L	P	Y	D	W	S	I	F	N	D	F	D	H	E	S	P	A	Q	N	E	G	G	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				S	S						T								S	T	T				T	T	S					S				G	G	G	G	S				T	T		T	T	T	G	G	G	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	N	G	G	E	A	W	Y	R	K	T	F	K	L	D	E	K	D	L	K	K	N	V	R	L	T	F	D	G	V	Y	M	D	S	Q	V	Y	V	N	G	Q	L	V	G	H	Y	P	N	G	Y	N	Q	F	S	Y	D	I	T	K	Y	L	Q	K	D	G	R	E	N	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																G	G	G	T	T	S							S			B	S	S						T	T									S	S	S							G	G	G	S		G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	V	H	A	V	N	K	Q	P	S	S	R	W	Y	S	G	S	G	I	Y	R	D	V	T	L	Q	V	T	D	K	V	H	V	E	K	N	G	T	T	I	L	T	P	K	L	E	E	Q	Q	H	G	K	V	E	T	H	V	T	S	K	I	V	N	T	D	D	K	D	H	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S			S	S								S									S													T	T					T	T	S														S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	V	A	E	Y	Q	I	V	E	R	G	G	H	A	V	T	G	L	V	R	T	A	S	R	T	L	K	A	H	E	S	T	S	L	D	A	I	L	E	V	E	R	P	K	L	W	T	V	L	N	D	K	P	A	L	Y	E	L	I	T	R	V	Y	R	D	G	Q	L	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S		B		S												T	T													S			B			T	T	S	S	S													T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	K	K	D	L	F	G	Y	R	Y	Y	H	W	T	P	N	E	G	F	S	L	N	G	E	R	I	K	F	H	G	V	S	L	H	H	D	H	G	A	L	G	A	E	E	N	Y	K	A	E	Y	R	R	L	K	Q	M	K	E	M	G	V	N	S	I	R	T	T	H	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								B							T	T	T					T	T												S			G	G	G	T	T																	T	T							T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	S	E	Q	T	L	Q	I	A	A	E	L	G	L	L	V	Q	E	E	A	F	D	T	W	Y	G	G	K	K	P	Y	D	Y	G	R	F	F	E	K	D	A	T	H	P	E	A	R	K	G	E	K	W	S	D	F	D	L	R	T	M	V	E	R	G	K	N	N	P	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T									S		S	S	S		S	S	T	T	S	G	G	G	G	T	T	S	B			S	T	T			T	T		B														T	T		T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	F	M	W	S	I	G	N	E	I	G	E	A	N	G	D	A	H	S	L	A	T	V	K	R	L	V	K	V	I	K	D	V	D	K	T	R	Y	V	T	M	G	A	D	K	F	R	F	G	N	G	S	G	G	H	E	K	I	A	D	E	L	D	A	V	G	F	N	Y	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S		T	T		S	S	S																T	T			S	S							S	G	G	G	S	T	T	S		S	T	T					T	T	S	S						S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	N	Y	K	A	L	R	A	K	H	P	K	W	L	I	Y	G	S	Q	T	S	S	A	T	R	T	R	G	S	Y	Y	R	P	E	R	E	L	K	H	S	N	G	P	E	R	N	Y	E	Q	S	D	Y	G	N	D	R	V	G	W	G	K	T	A	T	A	S	W	T	F	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T											B				T	T					T	T	S				S				G	G	G	T	T				T	T	T	T				T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	R	D	N	A	G	Y	A	G	Q	F	I	W	T	G	T	D	Y	I	G	E	P	T	P	W	H	N	Q	N	Q	T	P	V	K	S	S	Y	F	G	I	V	D	T	A	G	I	P	K	H	D	F	Y	L	Y	Q	S	Q	W	V	S	V	K	K	K	P	M	V	H	L	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T									S	B			B	S			T	T	S	T	T		T	T	S	S			B		S			S	B		T	T	S		B												S		T	T	T								S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	H	W	N	W	E	N	K	E	L	A	S	K	V	A	D	S	E	G	K	I	P	V	R	A	Y	S	N	A	S	S	V	E	L	F	L	N	G	K	S	L	G	L	K	T	F	N	K	K	Q	T	S	D	G	R	T	Y	Q	E	G	A	N	A	N	E	L	Y	L	E	W	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S										T	T			T	T	S									S	S	S							T	T														T	T								S	S	T	T			S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	V	A	Y	Q	P	G	T	L	E	A	I	A	R	D	E	S	G	K	E	I	A	R	D	K	I	T	T	A	G	K	P	A	A	V	R	L	I	K	E	D	H	A	I	A	A	D	G	K	D	L	T	Y	I	Y	Y	E	I	V	D	S	Q	G	N	V	V	P	T	A	N	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S									T	T	S													S									S		S				S	S	S	S												T	T	S		B		T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	L	V	R	F	Q	L	H	G	Q	G	Q	L	V	G	V	D	N	G	E	Q	A	S	R	E	R	Y	K	A	Q	A	D	G	S	W	I	R	K	A	F	N	G	K	G	V	A	I	V	K	S	T	E	Q	A	G	K	F	T	L	T	A	H	S	D	L	L	K	S	N	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S											T	T					S	S			T	T	S							B	T	T										S	S											T	T	S	B
	.	.	.	.	.	.	.
Sequence	T	V	F	T	G	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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