PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4csdA_

Fold library id	PDB Header	Molecule	Title
c4csdA_	PDB header: fucose-binding protein	Chain: A: PDB Molecule: fucose-binding lectin protein;	PDBTitle: structure of monomeric ralstonia solanacearum lectin

Links to external resources
Added to library: Sat Oct 11 08:35:52 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M S S V Q T A A T S W G T V P S I R V Y T A N N G K I T E R C W D G K G W Y T G A F N E P G D N V S V T S W L V G S A I H I R V Y A S T G T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T T T T T S S S
S T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T T T E W C W D G N G W T K G A Y T S D Q T A A T S W G T V P S I R V Y T A N N G K I T E R C W D G K G W Y T G A F N E P G D N V S V T S W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S S
T T T T T T S S S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L V G S A I H I R V Y A S T G T T T E W C W D G N G W T K G A Y T S S T V P G D Q T A A T S W G T V P S I R V Y T A N N G K I T E R C W D G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S S S
S
T T
T T T T T T S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . .

Sequence K G W Y T G A F N E P G D N V S V T S W L V G S A I H I R V Y A S T G T T T T E W C W D G N G W T K G A Y T A T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S T T B T S S S S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	S	S	V	Q	T	A	A	T	S	W	G	T	V	P	S	I	R	V	Y	T	A	N	N	G	K	I	T	E	R	C	W	D	G	K	G	W	Y	T	G	A	F	N	E	P	G	D	N	V	S	V	T	S	W	L	V	G	S	A	I	H	I	R	V	Y	A	S	T	G	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B									T	T	T	T									T	T								S	S	S												S										T	T											T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	T	T	E	W	C	W	D	G	N	G	W	T	K	G	A	Y	T	S	D	Q	T	A	A	T	S	W	G	T	V	P	S	I	R	V	Y	T	A	N	N	G	K	I	T	E	R	C	W	D	G	K	G	W	Y	T	G	A	F	N	E	P	G	D	N	V	S	V	T	S	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	S	S																	T	T	T	T									T	T								S	S	S												S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	V	G	S	A	I	H	I	R	V	Y	A	S	T	G	T	T	T	E	W	C	W	D	G	N	G	W	T	K	G	A	Y	T	S	S	T	V	P	G	D	Q	T	A	A	T	S	W	G	T	V	P	S	I	R	V	Y	T	A	N	N	G	K	I	T	E	R	C	W	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T																			S	S	S	S					S							T	T									T	T	T	T									T	T								S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Sequence	K	G	W	Y	T	G	A	F	N	E	P	G	D	N	V	S	V	T	S	W	L	V	G	S	A	I	H	I	R	V	Y	A	S	T	G	T	T	T	T	E	W	C	W	D	G	N	G	W	T	K	G	A	Y	T	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S												S										T	T											B	T								S	S	S	S