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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4crnX_

Fold library idPDB HeaderMoleculeTitle
c4crnX_PDB header: translationChain: X: PDB Molecule: erf1 in ribosome-bound erf1-erf3-gdpnp complex;PDBTitle: cryo-em of a pretermination complex with erf1 and erf3


Added to library: Sat Jul 26 08:21:49 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MDNEVEKNIEIWKVKKLVQSLEKARGNGTSMISLVIPPKGLIPLYQKMLTDEYGTASNIKSRVNRLSVLS
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Known secondary structure (DSSP)



ST

S
SS

TTS
TT


 .........80.........90.........100.........110.........120.........130.........140
Sequence AITSTQQKLKLYNTLPKNGLVLYCGDIITEDGKEKKVTFDIEPYKPINTSLYLCDNKFHTEVLSELLQAD
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Known secondary structure (DSSP) TT
SS

TT




STT





S


S


SS



TTS


 .........150.........160.........170.........180.........190.........200.........210
Sequence DKFGFIVMDGQGTLFGSVSGNTRTVLHKFTVDLPKKHGRGGQSALRFARLREEKRHNYVRKVAEVAVQNF
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Known secondary structure (DSSP) S


SS

TT




S




SSS
STTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence ITNDKVNVKGLILAGSADFKTDLAKSELFDPRLACKVISIVDVSYGGENGFNQAIELSAEALANVKYVQE
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Known secondary structure (DSSP) TTSSS

STTTTSSSSS
TTTGGG



SS
S
SSSS
SSSS

 .........290.........300.........310.........320.........330.........340.........350
Sequence KKLLEAYFDEISQDTGKFCFGIDDTLKALDLGAVEKLIVFENLETIRYTFKDAEDNEVIKFAEPEAKDKS
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Known secondary structure (DSSP) GGGTTSS

B

SSSSSSS

STT






SSSS


S

TTTTTGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence FAIDKATGQEMDVVSEEPLIEWLAANYKNFGATLEFITDKSSEGAQFVTGFGGIGAMLRYKVNFEQLVDE
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Known secondary structure (DSSP) GG

TTT










TTTSTTS

STTS





SSSS
SS






SS
 .
Sequence S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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