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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4crnP_

Fold library idPDB HeaderMoleculeTitle
c4crnP_PDB header: translationChain: P: PDB Molecule: erf3 in ribosome bound erf1-erf3-gdpnp complex;PDBTitle: cryo-em of a pretermination complex with erf1 and erf3


Added to library: Sat Jul 26 08:32:29 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GGKDHVSLIFMGHVDAGKSTMGGNLLYLTGSVDKRTIEKYEREAKDAGRQGWYLSWVMDTNKEERNDGKT
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Known secondary structure (DSSP)

S






SSS
TTTTSS

TTTTS



TTT

SSS
SSTTT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence IEVGKAYFETEKRRYTILDAPGHKMYVSEMIGGASQADVGVLVISARKGEYETGFERGGQTREHALLAKT
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Known secondary structure (DSSP) SSTT
B

B
SS
B

B
B

SSSSTTS


SS


STTT

STTSTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QGVNKMVVVVNKMDDPTVNWSKERYDQCVSNVSNFLRAIGYNIKTDVVFMPVSGYSGANLKDHVDPKECP
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Known secondary structure (DSSP) T







SSTTTTTT
S
SSSSS


STT



BTTTB
SS
S



SSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence WYTGPTLLEYLDTMNHVDRHINAPFMLPIAAKMKDLGTIVEGKIESGHIKKGQSTLLMPNKTAVEIQNIY
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Known secondary structure (DSSP) T

S

TTTS



SS

S

SSS

BS


TT
TTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence NETENEVDMAMCGEQVKLRIKGVEEEDISPGFVLTSPKNPIKSVTKFVAQIAIVELKSIIAAGFSCVMHV
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Known secondary structure (DSSP)
SSS
SS



TTSSSS
STT

TT

SSS



BSS
S
SS
B
TT
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence HTAIEEVHIVKLLHKLEKGTNRKSKKPPAFAKKGMKVIAVLETEAPVCVETYQDYPQLGRFTLRDQGTTI
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Known secondary structure (DSSP) SS





BSSSS
S
B

SS
S
SSSS

S
BSS


B

TTT
TTTTSSSS

 .........430
Sequence AIGKIVKIAE
Predicted secondary structure
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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