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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4cr4U_

Fold library idPDB HeaderMoleculeTitle
c4cr4U_PDB header: hydrolaseChain: U: PDB Molecule: 26s proteasome regulatory subunit rpn8;PDBTitle: deep classification of a large cryo-em dataset defines the2 conformational landscape of the 26s proteasome


Added to library: Sat Apr 5 08:18:02 2014
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence HEKVTIAPLVLLSALDHYERTQTKENKRCVGVILGDANSSTIRVTNSFALPFEEDEKNSDVWFLDHNYIE
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TT

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SSS


SSSTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence NMNEMCKKINAKEKLIGWYHSGPKLRASDLKINELFKKYTQNNPLLLIVDVKQQGVGLPTDAYVAIEQEK
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Known secondary structure (DSSP)
TT



S

SSTTT
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B



 .........150.........160.........170.........180.........190.........200.........210
Sequence TFLHLPCTIEAEEAEEIGVEHLLRIRLTNQLKSLKGLQSKLKDVVEYLDKVIHTILGKLQDVFNLNNLQK
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Known secondary structure (DSSP) B


B


B








TTT
 .........220.........230.........240.........250.....
Sequence ALTVKTNDELMVIYISNLVRSIIAFDDLIENKIQNKKIQEQRVKD
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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