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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4cr2T_

Fold library idPDB HeaderMoleculeTitle
c4cr2T_PDB header: hydrolaseChain: T: PDB Molecule: 26s proteasome regulatory subunit rpn12;PDBTitle: deep classification of a large cryo-em dataset defines the2 conformational landscape of the 26s proteasome


Added to library: Sat Apr 5 08:19:15 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MPSLAELTKSLSIAFENGDYAACEKLLPPIKIELIKNNLLIPDLSIQNDIYLNDLMITKRILEVGALASI
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Known secondary structure (DSSP)


SSSS
SS
SS

S

SS

STTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence QTFNFDSFENYFNQLKPYYFSNNHKLSESDKKSKLISLYLLNLLSQNNTTKFHSELQYLDKHIKNLEDDS
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Known secondary structure (DSSP) TT

SS


SS

STT
SS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence LLSYPIKLDRWLMEGSYQKAWDLLQSGSQNISEFDSFTDILKSAIRDEIAKNTELSYDFLPLSNIKALLF
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Known secondary structure (DSSP) T

STTTTTS
STT
 .........220.........230.........240.........250.........260.........270..
Sequence FNNEKETEKFALERNWPIVNSKVYFNNQSKEKADYEDEMMHEEDQKTNIIEKAMDYAISIEN
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Known secondary structure (DSSP)


TT

TT





S
SS

SSS
SSS


Download:PDB structure FASTA sequence

Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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