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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4cr2P_

Fold library idPDB HeaderMoleculeTitle
c4cr2P_PDB header: hydrolaseChain: P: PDB Molecule: 26s proteasome regulatory subunit rpn5;PDBTitle: deep classification of a large cryo-em dataset defines the2 conformational landscape of the 26s proteasome


Added to library: Sat Apr 5 08:18:37 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AQNDCNSALDQLLVLEKKTRQASDLASSKEVLAKIVDLLASRNKWDDLNEQLTLLSKKHGQLKLSIQYMI
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Known secondary structure (DSSP)
TTT
SSSS
S
TS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence QKVMEYLKSSKSLDLNTRISVIETIRVVTENKIFVEVERARVTKDLVEIKKEEGKIDEAADILCELQVET
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Known secondary structure (DSSP)
TT
SSSSS
SS


T
 .........150.........160.........170.........180.........190.........200.........210
Sequence YGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISLHKREYLEV
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Known secondary structure (DSSP)
SSS
T

SS

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence AQYLQEIYQTDAIKSDEAKWKPVLSHIVYFLVLSPYGNLQNDLIHKIQNDNNLKKLESQESLVKLFTTNE
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Known secondary structure (DSSP) S
SS

TTT
TTSSSSS

 .........290.........300.........310.........320.........330.........340.........350
Sequence LMRWPIVQKTYEPVLNEDDLAFGGEANKHHWEDLQKRVIEHNLRVISEYYSRITLLRLNELLDLTESQTE
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Known secondary structure (DSSP) SSS

SSSS

SSSSS
S

STS
 .........360.........370.........380.........390.........400.........410.....
Sequence TYISDLVNQGIIYAKVNRPAKIVNFEKPKNSSQLLNEWSHNVDELLEHIETIGHLITKEEIMHGL
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Known secondary structure (DSSP) TS


TTTT







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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