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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4cofC_

Fold library idPDB HeaderMoleculeTitle
c4cofC_PDB header: transport proteinChain: C: PDB Molecule: gamma-aminobutyric acid receptor subunit beta-3;PDBTitle: crystal structure of a human gamma-aminobutyric acid receptor, the2 gaba(a)r-beta3 homopentamer


Added to library: Sat Jun 7 08:18:01 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SFVKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPL
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Known secondary structure (DSSP)
STT

TTS
TTTTSS
TTTT
GGG

SS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence NLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQN
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Known secondary structure (DSSP)

GGGGGGS



TT

SSS
S
TTS




TTTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence CTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIG
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Known secondary structure (DSSP) SS

TTTTTGGGS
STT


SSTT
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence YFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCF
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Known secondary structure (DSSP) TGGGGS
TT
TS


SS

 .........290.........300.........310.........320.........330.
Sequence VFVFLALLEYAFVNYIFFSQPARAAAIDRWSRIVFPFTFSLFNLVYWLYYV
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Known secondary structure (DSSP) TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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