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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4cnlA_

Fold library idPDB HeaderMoleculeTitle
c4cnlA_PDB header: choline-binding proteinChain: A: PDB Molecule: putative pneumococcal surface protein;PDBTitle: crystal structure of the choline-binding domain of cbpl2 from streptococcus pneumoniae


Added to library: Sat Feb 21 08:15:24 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TTSGWVKQDGAWYYFDGNGNLVKNAWQGSYYLKADGKMAQSEWIYDSSYQAWYYLKSDGSYAKNAWQGAY
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Known secondary structure (DSSP)


TT
TTS
B

STT
TTS
B

STTTT
TTS
B

STT
 .........80.........90.........100.........110.........120.........130.........140
Sequence YLKSNGKMAQGEWVYDSSYQAWYYLKSDGSYARNAWQGNYYLKSDGKMAKGEWVYDATYQAWYYLTSDGS
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Known secondary structure (DSSP)
TTS
B

STTTT
TTS
B

STT
TTS
B

STTTT
TTS
 .........150.........160.........170.........180..
Sequence YAYSTWQGNYYLKSDGKMAVNEWVDGGRYYVGADGVWKEVQA
Predicted secondary structure














SS confidence









































Known secondary structure (DSSP) B

STT
TTS
B

STTTT
TTS







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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