Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4cnjD_

Fold library idPDB HeaderMoleculeTitle
c4cnjD_PDB header: oxidoreductaseChain: D: PDB Molecule: l-amino acid oxidase;PDBTitle: l-aminoacetone oxidase from streptococcus oligofermentans2 belongs to a new 3-domain family of bacterial flavoproteins


Added to library: Sat Oct 18 09:28:42 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MNHFDTIIIGGGPAGMMATISSSFYGQKTLLLEKNKRLGKKLAGTGGGRCNVTNNGNLDDLMAGIPGNGR
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP)



STT


SSSSTTTTGGGTTTTT



S
T
TBTGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence FLYSVFSQFDNHDIINFFTENGVKLKVEDHGRVFPVTDKSRTIIEALEKKIAELGGTVITNTEIVSVKKT
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) GGS
TTT


GGGTT

T

S



 .........150.........160.........170.........180.........190.........200.........210
Sequence DELFTVRSSDQAWTCQKLIVTTGGKSYPSTGSTGFGHDIARHFKHTVTDLEAAESPLLTDFPHKALQGIS
Predicted secondary structure













































SS confidence





































































Known secondary structure (DSSP) TT
SS




SSSGGGT
SSTT

B


S

S
GGGTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LDDVTLSYGKHIITHDLLFTHFGLSGPAALRLSSFVKGGETIYLDVLPQMSQQDLADFLEEHREKSLKNC
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) TT
SSSGGG

SS
S
TTS
TTTSB
 .........290.........300.........310.........320.........330.........340.........350
Sequence LKILLPERIADFFTQPFPEKVKQLNLSEKEALIKQIKELPISVTGKMSLAKSFVTKGGVSLKEINPKTLE
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) TTS
TTS
SBSTT

S

GGGSS

B
GGGB
TTT
B
 .........360.........370.........380.........390.
Sequence SKLVPGLHFAGEVLDINAHTGGFNITSALCTGWVAGSLHYD
Predicted secondary structure














SS confidence








































Known secondary structure (DSSP) BSSSTT
GGGBS
B

TTTS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D