Fold library entry viewer: c4ckcD_

Added to library: Sat Mar 22 08:15:22 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	D	A	N	V	V	S	S	S	T	I	A	T	Y	I	D	A	L	A	K	N	A	S	E	L	E	Q	I	N	N	E	L	E	L	V	F	I	K	P	P	L	I	T	L	T	N	V	V	N	I	S	T	I	Q	E	S	F	I	R	F	T	V	T	N	K	E	G	V	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		T	T	T	S																	S												S	S			T								T	T		S													S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	T	K	I	P	L	S	K	V	H	G	L	D	V	K	N	V	Q	L	V	D	A	I	D	N	I	V	W	E	K	K	S	L	V	T	E	N	R	L	H	K	E	C	L	L	R	L	S	T	E	E	R	H	I	F	L	D	Y	K	K	Y	G	S	S	I	R	L	E	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T				S	S									T																			T	T																S	T	T	S	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	L	I	Q	A	K	T	K	N	F	T	I	D	F	K	L	K	Y	F	L	G	S	G	A	Q	S	K	S	S	L	L	H	A	I	N	H	P	K	S	R	P	N	T	S	L	E	I	E	F	T	P	R	D	N	E	T	V	P	Y	D	E	L	I	K	E	L	T	T	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S														T	T			S										T	T	S													S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	H	I	F	M	A	S	P	E	N	V	I	L	S	P	P	I	N	A	P	I	K	T	F	M	L	P	K	Q	D	I	V	G	L	D	L	E	N	L	Y	A	V	T	K	T	D	G	I	P	I	T	I	R	V	T	S	N	G	L	Y	C	Y	F	T	H	L	G	Y	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S		G	G	G										S	S							G	G	G	G	S	S				T	T								S	S									T	T							T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	R	Y	P	V	K	R	I	I	D	S	E	V	V	V	F	G	E	A	V	K	D	K	N	W	T	V	Y	L	I	K	L	I	E	I	N	D	R	L	E	E	S	K	Y	V	E	S	K	L	V	D	I	C	D	R	I	V	F	K	S	K	K	Y	E	G	P	F	T	T	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S			S	S											S	S	S																									T	T	T	S		S	S													S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	V	V	D	M	L	S	T	Y	L	P	K	Q	P	E	G	V	I	L	F	Y	S	K	G	P	K	S	N	I	D	F	K	I	K	K	E	N	T	I	D	Q	T	A	N	V	V	F	R	Y	M	S	S	E	P	I	I	F	G	E	S	S	I	F	V	E	Y	K	K	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	T		T	T							S	S	S	G	G	G	G							S	S													T	T		S	S						S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	N	D	K	G	F	P	K	E	Y	G	S	G	K	I	V	L	Y	N	G	V	N	Y	L	N	N	I	Y	C	L	E	Y	I	N	T	H	N	E	V	G	I	K	S	V	V	V	P	I	K	F	I	A	E	F	L	V	N	G	E	I	L	K	P	R	I	D	K	T	M	K	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T													S	S	S					T	T	T	T									G	G	G	T								S								T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	I	N	S	E	D	Y	Y	G	N	Q	H	N	I	I	V	E	H	L	R	D	Q	S	I	K	I	G	D	I	F	N	N	D	K	F	R	L	N	P	E	V	S	Y	F	T	N	K	R	T	R	G	P	L	G	I	L	S	N	Y	V	K	T	L	L	I	S	M	Y	C	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S			B	S												T	T	S		G	G	G	S					T	T		S	S	T	T			S	B		S	S																								T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	T	F	L	D	D	S	N	K	R	K	V	L	A	I	D	F	G	N	G	A	D	L	E	K	Y	F	Y	G	E	I	A	L	L	V	A	T	D	P	D	A	D	A	I	A	R	G	N	E	R	Y	N	K	L	N	S	G	I	K	T	K	Y	Y	K	F	D	Y	I	Q	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S			S							T	T		T	T	T	T	T							T	T		S							S																S		T	T	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	I	R	S	D	T	F	V	S	S	V	R	E	V	F	Y	F	G	K	F	N	I	I	D	W	Q	F	A	I	H	Y	S	F	H	P	R	H	Y	A	T	V	M	N	N	L	S	E	L	T	A	S	G	G	K	V	L	I	T	T	M	D	G	D	K	L	S	K	L	T	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S	T							T	T	S		S										S		G	G	G	T		S	G	G	G																														T			S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	K	T	F	I	I	H	K	N	L	P	S	S	E	N	Y	M	S	V	E	K	I	A	D	D	R	I	V	V	Y	N	P	S	T	M	S	T	P	M	T	E	Y	I	I	K	K	N	D	I	V	R	V	F	N	E	Y	G	F	V	L	V	D	N	V	D	F	A	T	I	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S	S		T	T	T	S									T	T							T	T	T	B	S	S																			T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.
Sequence	R	S	K	K	F	I	N	G	A	S	T	M	E	D	R	P	S	T	R	N	F	F	E	L	N	R	G	A	I	K	C	E	G	L	D	V	E	D	L	L	S	Y	Y	V	V	Y	V	F	S	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T						T	G	G	G	G																		S			S							G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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