Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4chtA_

Fold library idPDB HeaderMoleculeTitle
c4chtA_PDB header: cell cycleChain: A: PDB Molecule: dna topoisomerase 3-alpha;PDBTitle: crystal structure of the human topoisomerase iii alpha-rmi12 complex with bound calcium ion


Added to library: Sat Feb 15 08:23:13 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FSRAAMEMALRGVRKVLCVAEKNDAAKGIADLLSNGRMRRREGLSKFNKIYEFDYHLYGQNVTMVMTSVS
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)

TT

SSTT



SSTTS
TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence GHLLAHDFQMQFRKWQSCNPLVLFEAEIEKYCPENFVDIKKTLERETRQCQALVIWTDCDREGENIGFEI
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) S
S

SGGGS
GGGGGTS


GGG
SS
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IHVCKAVKPNLQVLRARFSEITPHAVRTACENLTEPDQRVSDAVDVRQELDLRIGAAFTRFQTLRLQRIF
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) TT
TT



SS
SS
B


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence PEVLAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVTHDHKDGIVEFNWKRHRLFNHTACLVLY
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) TT





TT



TTTT

BS
 .........290.........300.........310.........320.........330.........340.........350
Sequence QLCVEDPMATVVEVRSKPKSKWRPQALDTVELEKLASRKLRINAKETMRIAEKLYTQGYISYPRTETNIF
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) SS








TT


TTSB

S




S
 .........360.........370.........380.........390.........400.........410.........420
Sequence PRDLNLTVLVEQQTPDPRWGAFAQSILERGGPTPRNGNKSDQAHPPIHPTKYTNNLQGDEQRLYEFIVRH
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP)
TTS
TTTT
TTTTTS





S


SS


S
B
S

S


 .........430.........440.........450.........460.........470.........480.........490
Sequence FLACCSQDAQGQETTVEIDIAQERFVAHGLMILARNYLDVYPYDHWSDKILPVYEQGSHFQPSTVEMVDG
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) TS

TT
GGGGT
TTS



B





TT


S
 .........500.........510.........520.........530.........540.........550.........560
Sequence ETSPPKLLTEADLIALMEKHGIGTDATHAEHIETIKARMYVGLTPDKRFLPGHLGMGLVEGYDSMGYEMS
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)







TT
STTTTTTS
TT


TTSS
TT
 .........570.........580.........590.........600.........610.........
Sequence KPDLRAELEADLKLICDGKKDKFVVLRQQVQKYKQVFIEAVAKAKKLDEALAQYFGNGT
Predicted secondary structure









SS confidence


























































Known secondary structure (DSSP) SSTSS
TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D