Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4cg4D_

Fold library idPDB HeaderMoleculeTitle
c4cg4D_PDB header: actin-binding proteinChain: D: PDB Molecule: pyrin;PDBTitle: crystal structure of the chs-b30.2 domains of trim20


Added to library: Sat May 2 09:06:02 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SEVALEHKKKIQKQLEHLKKLRKSGEEQRSYGEEKAVSFLKQTEALKQRVQRKLEQVYYFLEQQEHFFVA
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP)
 .........80.........90.........100.........110.........120.........130.........140
Sequence SLEDVGQMVGQIRKAYDTRVSQDIALLDALIGELEAKECQSEWELLQDIGDILHRAKTVPVPEKWTTPQE
Predicted secondary structure







SS confidence





































































Known secondary structure (DSSP) GGGS
TT









 .........150.........160.........170.........180.........190.........200.........210
Sequence IKQKIQLLHQKSEFVEKSTKYFSETLRSEMEMFNVPELIGAQAHAVNVILDAETAYPNLIFSDDLKSVRL
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) GGGS

TTB


GGGS
TT
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GNKWERLPDGPQRFDSCIIVLGSPSFLSGRRYWEVEVGDKTAWILGACKTSISRKGNMTLSPENGYWVVI
Predicted secondary structure













































SS confidence





































































Known secondary structure (DSSP)

TT





TTS
SSSS


BSSS
TT
S
TT

SSS



SGGGT
 .........290.........300.........310.........320.........330.........340.........350
Sequence MMKENEYQASSVPPTRLLIKEPPKRVGIFVDYRVGSISFYNVTARSHIYTFASCSFSGPLQPIFSPGTRD
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) TT

SS


SS

STTTTTTTT
S



S




T
 .........360.........370......
Sequence GGKNTAPLTICPVGGQGPDALEVLFQ
Predicted secondary structure

















SS confidence

























Known secondary structure (DSSP) TTTT
S


TT



S
GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D