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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4cfhA_

Fold library idPDB HeaderMoleculeTitle
c4cfhA_PDB header: transferaseChain: A: PDB Molecule: 5'-amp-activated protein kinase catalytic subunit alpha-1;PDBTitle: structure of an active form of mammalian ampk


Added to library: Sat Jan 11 11:03:18 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL
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Known secondary structure (DSSP)

TT

SSS
TTT

TTTT
T


TTB

 .........80.........90.........100.........110.........120.........130.........140
Sequence YQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDA
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Known secondary structure (DSSP)
SS

SS
BTTTTTTSSSS

TT
SS

TTS
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence HMNAKIADFGLSNMMSDGEFLRSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP
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Known secondary structure (DSSP) T




TT


TT





S
SSS

TT



SSS
SS

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDAVAYHLIIDN
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Known secondary structure (DSSP) TT




TT

T
SSTTTS

TSTT

TTSSS




 .........290.........300.........310.........320.........330.........340.........350
Sequence RRIMNEAKDFYLATSPPDSFLDDHHLTRPHPERVPFLVAETPRAAKWHLGIRSQSRPNDIMAEVCRAIKQ
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Known secondary structure (DSSP) TGGGTS






S

S






GGGSSTT





S
S
T
 .........360.........370.........380.........390.........400.
Sequence LDYEWKVVNPYYLRVRRKNPVTSTFSKMSLQLYQVDSRTYLLDFRSIDDEI
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Known secondary structure (DSSP) TT
B

TT
TTT


SSS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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