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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4cffB_

Fold library idPDB HeaderMoleculeTitle
c4cffB_PDB header: transferaseChain: B: PDB Molecule: 5'-amp-activated protein kinase subunit beta-1;PDBTitle: structure of full length human ampk in complex with a small2 molecule activator, a thienopyridone derivative (a-769662)


Added to library: Sat Jan 11 09:36:35 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RPTVFRWTGGGKEVYLSGSFNNWSKLPLTRHNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGT
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Known secondary structure (DSSP)

S

S
TTTTT


B





STT

TTS

SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VNNIIQVKKTDFEVFDALMVDSQKCYHQEPYVPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLY
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Known secondary structure (DSSP)
GGGSST












GGGG

GGGS


TTS
TT





TTSTT
 .........150.........160.........170
Sequence ALSIKDGVMVLSATHRYKKKYVTTLLYKPI
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Known secondary structure (DSSP)


BTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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