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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4cdbA_

Fold library idPDB HeaderMoleculeTitle
c4cdbA_PDB header: toxinChain: A: PDB Molecule: listeriolysin o;PDBTitle: crystal structure of listeriolysin o


Added to library: Sat Apr 26 08:15:58 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MAPPASPPASPKTPIEKKHADEIDKYIQGLDYNKNNVLVYHGDAVTNVPPRKGYKDGNEYIVVEKKKKSI
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Known secondary structure (DSSP)












T



TTSSS









TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence NQNNADIQVVNAISSLTYPGALVKANSELVENQPDVLPVKRDSLTLSIDLPGMTNQDNKIVVKNATKSNV
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Known secondary structure (DSSP)
S

GGGGGG

TT

STT


B



B



TT

TTTTSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence NNAVNTLVERWNEKYAQAYPNVSAKIDYDDEMAYSESQLIAKFGTAFKAVNNSLNVNFGAISEGKMQEEV
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Known secondary structure (DSSP) TTTGGG
S

B




TT


TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ISFKQIYYNVNVNEPTRPSRFFGKAVTKEQLQALGVNAENPPAYISSVAYGRQVYLKLSTNSHSTKVKAA
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Known secondary structure (DSSP)


SSGGGGB
TT

TT
SSSS




TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FDAAVSGKSVSGDVELTNIIKNSSFKAVIYGGSAKDEVQIIDGNLGDLRDILKKGATFNRETPGVPIAYT
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Known secondary structure (DSSP) T


TTSTS
SSSS

GGG
SSTTTTTSB

SS


 .........360.........370.........380.........390.........400.........410.........420
Sequence TNFLKDNELAVIKNNSEYIETTSKAYTDGKINIDHSGGYVAQFNISWDEVNYDPEGNEIVQHKNWSENNK
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Known secondary structure (DSSP) TTT

B




SS

TTS

TTTT
 .........430.........440.........450.........460.........470.........480........
Sequence SKLAHFTSSIYLPGNARNINVYAKECTGLAWEWWRTVIDDRNLPLVKNRNISIWGTTLYPKYSNKVDN
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Known secondary structure (DSSP)
B
SS
TTTT


S
SSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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