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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ccfD_

Fold library idPDB HeaderMoleculeTitle
c4ccfD_PDB header: viral proteinChain: D: PDB Molecule: fusion glycoprotein f0;PDBTitle: structure of respiratory syncytial virus f protein head domain


Added to library: Sat Nov 16 08:53:15 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NITEEFYQSTCSAVSKGYLSALRTGWYTSVITINRLLEITREFSVNAGVTTPVSTYMLTNSELLSLINDM
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Known secondary structure (DSSP)

TTTT

TTTSS

TTTS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence PITNDQKKLMSNNVQIVRQQSYSIMSIIEVLAYVVQLPLYGVIDTPCWKLHTSPLCTTSNICLTRTDRGW
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Known secondary structure (DSSP) SS
TTT
















 .........150.........160.........170.........180.........190.........200.........210
Sequence YCDNAGSVSFFPQAETCKVQSNRVFCDTMNSLTLPSEVNLCNVDIFNPKYDCKIMTSKTDVSSSVITSLG
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Known secondary structure (DSSP) TT
SGGGTTGGG

GGGGGGGT
TT
SSS


SS



SS
 .........220.........230.........240.........250.........260........
Sequence AIVSCYGKTKCTASNKNRGIIKTFSNGCDYVSNKGVDTVSVGNTLYYVNKQEGKSLYV
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Known secondary structure (DSSP)
TT

TTT
STTT

TTSS









Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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