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| Protein Homology/analogY Recognition Engine V 2.2 | |||||||
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| Fold library id | PDB Header | Molecule | Title | 
|---|---|---|---|
| c4c9bB_ | PDB header: splicing | Chain: B: PDB Molecule: pre-mrna-splicing factor cwc22 homolog; | PDBTitle: crystal structure of eif4aiii-cwc22 complex | 
| Added to library: Sat Nov 16 14:01:00 2013 | |
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| Links to external resources | |
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|   | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | 
| Sequence | D | P | L | L | T | R | T | G | G | A | Y | I | P | P | A | K | L | R | M | K | N | S | L | A | Y | Q | R | M | S | W | E | A | L | K | K | S | I | N | G | L | I | N | K | V | N | I | S | N | I | S | I | I | I | Q | E | L | L | Q | E | N | I | V | R | G | R | G | L | L | S | R | 
| Predicted secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | |||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  |  | T | S | T | T | T | T |  |  |  |  |  |  |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | 
| Sequence | S | V | L | Q | A | Q | S | A | S | P | I | F | T | H | V | Y | A | A | L | V | A | I | I | N | S | K | F | P | Q | I | G | E | L | I | L | K | R | L | I | L | N | F | R | K | G | Y | R | R | N | D | K | Q | L | C | L | T | A | S | K | F | V | A | H | L | I | N | Q | N | V | A | 
| Predicted secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) |  |  |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | B |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | 
| Sequence | H | E | V | L | C | L | E | M | L | T | L | L | L | E | R | P | T | D | D | S | V | E | V | A | I | G | F | L | K | E | C | G | L | K | L | T | Q | V | S | P | R | G | I | N | A | I | F | E | R | L | R | N | I | L | H | E | S | E | I | D | K | R | V | Q | Y | M | I | E | V | M | 
| Predicted secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | |||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | T |  |  |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | 
| Sequence | F | A | V | R | K | D | G | F | K | D | H | P | I | I | L | E | G | L | D | L | V | E | E | D | D | Q | F | T | H | M | L | P | L | E | D | D | Y | N | P | E | D | V | L | N | V | F | K | M | D | P | N | F | M | E | N | E | E | K | Y | K | A | I | K | K | E | I | L | |||
| Predicted secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) |  |  |  |  |  | T | T | S | T | T | S | S | T | T | S | G | G | G | B | S | S | S | G | G | G | G | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 
| Download: | PDB structure | FASTA sequence | 
| 
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