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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4c9bB_

Fold library idPDB HeaderMoleculeTitle
c4c9bB_PDB header: splicingChain: B: PDB Molecule: pre-mrna-splicing factor cwc22 homolog;PDBTitle: crystal structure of eif4aiii-cwc22 complex


Added to library: Sat Nov 16 14:01:00 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DPLLTRTGGAYIPPAKLRMKNSLAYQRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGRGLLSR
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Known secondary structure (DSSP)

SS



S







TTTTS
TTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVA
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Known secondary structure (DSSP)
GGG
T
TTSB
 .........150.........160.........170.........180.........190.........200.........210
Sequence HEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLTQVSPRGINAIFERLRNILHESEIDKRVQYMIEVM
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Known secondary structure (DSSP)
TS


SS


 .........220.........230.........240.........250.........260.........270.......
Sequence FAVRKDGFKDHPIILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEIL
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Known secondary structure (DSSP) TTSTT

SS
TT


S
GGG


B


SSS




GGGGS



TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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