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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4c95C_

Fold library idPDB HeaderMoleculeTitle
c4c95C_PDB header: dna replicationChain: C: PDB Molecule: dna polymerase alpha-binding protein;PDBTitle: crystal structure of the carboxy-terminal domain of yeast2 ctf4 bound to sld5


Added to library: Sat May 3 08:11:27 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FRYMPFSPAGTPFGFTDRRYLTMNEVGYVSTVKNSEQYSITVSFFDVGRFREYHFEDLFGYDLCFLNEKG
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Known secondary structure (DSSP)




B
TT



TTSS
SS
SSSS
TTTS

SS



SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence TLFGQSKTGQIQYRPHDSIHSNWTKIIPLQAGERITSVAATPVRVIVGTSLGYFRSFNQFGVPFAVEKTS
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Known secondary structure (DSSP)
TTT
SSSSS





TT


SS
TT

TT


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence PIVALTAQNYRVFSVHYSQFHGLSYSLSELGTSSKRYYKRECPLPMSLPNDANLDYYNFNPMGIKSLFFS
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Known secondary structure (DSSP)
TTTTT
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TT
TT



 .........220.........230.........240.........250.........260.........270.........280
Sequence SYGDPCIFGSDNTLLLLSKWRSPEESKWLPILDSNMEIWKMSGGKETTDIHVWPLALAYDTLNCILVKGK
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Known secondary structure (DSSP) TTS

TT

TT
TTS
TTS


SSTTSS
 .........290......
Sequence HIWPEFPLPLPSEMEI
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Known secondary structure (DSSP) SSS

SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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