Fold library entry viewer: c4c90B_

Added to library: Sat Nov 16 09:20:13 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	Q	F	V	I	F	T	P	A	G	N	H	F	P	L	V	A	N	G	V	P	C	P	I	Y	I	D	S	S	E	D	K	G	V	M	I	A	A	G	N	L	Q	Q	D	I	L	Q	V	C	G	K	K	P	E	L	L	T	S	T	S	S	K	R	C	I	I	A	G	T	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S			T	T							T	T									T	T	S																				S	S						S	S	S			S								T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	T	P	F	I	K	K	L	M	S	A	G	K	I	D	K	K	E	L	D	G	K	N	E	K	Y	I	L	Q	V	I	A	N	P	C	E	G	I	D	E	A	V	V	I	I	G	S	D	R	R	G	T	I	Y	G	I	Y	E	L	S	E	Q	M	G	V	S	P	W	Y	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T									G	G	G				S	T	T	T	T	T		S	S								S			S	T	T		S								S	S														T	T	T			T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	W	A	D	V	P	V	M	K	Q	A	N	V	Y	I	K	P	G	Q	Y	S	D	G	E	P	A	V	T	Y	R	G	I	F	L	N	D	E	A	P	C	L	T	R	W	V	K	H	T	Y	G	T	N	Y	G	D	H	R	F	Y	A	R	V	C	E	L	I	L	R	L	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S								S						S	S								S	S	S								S		T	T													S	S																T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	N	F	L	W	P	A	M	W	S	W	A	F	Y	A	D	D	P	Q	N	S	K	T	A	S	E	M	G	V	I	I	G	T	S	H	H	E	P	M	A	R	N	H	Q	E	W	S	R	K	R	K	E	Y	G	A	W	D	Y	T	T	N	Q	K	V	I	D	Q	F	F	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S																		T							T	T	S		T	T								T	T									T	T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	I	E	R	M	Q	G	T	E	D	I	V	T	I	G	M	R	G	D	N	V	K	L	L	E	N	V	V	K	N	Q	R	K	I	I	E	E	V	T	K	R	P	A	K	E	T	P	Q	V	W	A	L	Y	K	E	V	L	D	Y	Y	D	M	R	V	P	D	D	V	I	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T	S																																T	S		G	G	G	S																				T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	L	C	D	D	N	W	G	N	V	C	R	L	P	N	A	K	E	R	K	H	P	G	G	W	G	M	Y	Y	H	V	D	Y	V	G	A	P	R	N	S	K	W	L	N	V	T	P	I	Q	N	M	W	E	Q	L	Q	L	T	Y	D	Y	G	V	E	K	L	W	I	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B		S	S	S		B										T		T	T								S	S	B		S	S	S			B		S	S																		T	T			S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	G	D	L	K	P	M	E	Y	P	I	T	L	F	M	D	M	A	W	N	P	K	Q	F	N	V	S	N	L	L	D	H	P	R	R	F	C	A	Q	Q	F	G	E	D	Q	A	D	E	A	M	R	I	L	N	L	Y	S	K	Y	N	G	R	V	T	G	E	M	L	D	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S	T	T															G	G	G			T	T	T	T	T													G	G	G																		S		T	T	T			T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	T	Y	N	L	E	T	G	E	W	K	Q	V	S	D	E	Y	L	K	L	E	A	E	A	L	R	Q	Y	I	S	L	K	P	E	Y	K	D	A	Y	K	Q	L	I	L	F	P	V	Q	A	M	A	N	L	Y	E	M	Y	Y	A	Q	A	M	N	H	K	L	Y	K	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	S		T	T	T	T																						T	S		G	G	G								T																										T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	N	P	Q	A	N	E	W	A	D	K	V	E	Q	A	F	A	R	D	K	A	L	S	D	D	Y	N	N	I	M	S	G	G	K	W	K	N	M	M	I	Q	K	H	I	G	Y	T	S	W	N	D	N	F	P	A	D	T	L	P	K	I	Y	R	I	E	N	P	E	K	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T																									T	G	G	G	G	T	T	T	T	S	S					S			S	S	S	S			S	S	S										S		G	G	G
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	G	G	Y	V	F	T	G	Q	D	G	Y	I	A	I	E	A	E	H	Y	Y	S	A	K	A	A	P	D	T	E	W	T	V	I	P	Y	M	G	R	T	L	S	G	M	A	L	M	P	Y	T	Q	P	T	D	G	A	S	I	S	Y	K	I	K	L	P	K	G	I	D	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								B	T	T						T	T			S						T	T								T		S	S	S	S								S	S	S			T	T											T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	T	V	H	V	I	V	K	S	T	L	A	F	H	D	R	K	G	H	E	Y	S	I	G	F	E	G	G	K	D	Q	T	I	N	F	N	H	N	L	N	E	L	P	E	N	V	Y	S	I	Y	Y	P	T	V	A	R	R	I	V	E	K	K	A	K	L	N	V	P	N	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S		S	S									T	T	S								S	T	T		S	S	S	T	T	T	T	T	T	T						T	T	T														T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.
Sequence	D	G	M	Q	T	I	T	F	K	P	L	D	P	G	I	V	L	E	K	L	V	V	D	Y	G	G	Y	K	K	S	Y	L	F	M	N	E	S	K	S	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T											S	S	S										S	S						T	T		S

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PDB structure

FASTA sequence

Hidden Markov model

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