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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4c8qH_

Fold library idPDB HeaderMoleculeTitle
c4c8qH_PDB header: transcriptionChain: H: PDB Molecule: dna topoisomerase 2-associated protein pat1;PDBTitle: crystal structure of the yeast lsm1-7-pat1 complex


Added to library: Sat Oct 19 08:25:48 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KSGGKKFILELIETVYEEILDLEANLRNGQQTDSTAMWEALHIDDSSYDVNPFISMLSFDKGIKIMPRIF
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Known secondary structure (DSSP)

S
STTSSS



TTT
SS


SSS
TTST
 .........80.........90.........100.........110.........120.........130.........140
Sequence NFLDKQQKLKILQKIFNELSHLQIIILSSYKTTPKPTLTQLKKVDLFQMIILKIIVSFLSNNSNFIEIMG
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Known secondary structure (DSSP) T

TTTTGGG
TTTTTT
TTT
SS

S

 .........150.........160.........170.........180.........190.........200.........210
Sequence LLLQLIRNNNVSFLTTSKIGLNLITILISRAALIKQDSSPEISTWNEIYDKLFTSLESKIQLIFPPREYN
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Known secondary structure (DSSP) TS
TTTGGGST

S


TTSSS

 .........220.........230.........240.........250.........260.........270.........
Sequence DHIMRLQNMDEAYIWQFLASLALKLNHQRIIIDEVRDEIFATINEAETLQIIYNKEKLYQDLNLFLNVM
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Known secondary structure (DSSP)






T










Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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