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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4c8dA_

Fold library idPDB HeaderMoleculeTitle
c4c8dA_PDB header: oxidoreductaseChain: A: PDB Molecule: lysine-specific demethylase 3b;PDBTitle: crystal structure of jmjc domain of human histone 3 lysine-2 specific demethylase 3b (kdm3b)


Added to library: Sat Oct 19 08:28:48 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TSHSWLCDGRLLCLHDPSNKNNWKIFRECWKQGQPVLVSGVHKKLKSELWKPEAFSQEFGDQDVDLVNCR
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Known secondary structure (DSSP)

TTTTS
TT
TTTT



GGGGS
GGGG
TTSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence NCAIISDVKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTKRDG
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Known secondary structure (DSSP) T

TTTBGGGS
B
TTS
B


S
S
TT

SSSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence RLNLASRLPSYFPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVGIPIGEGAHDEEVLKTIDEGDA
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Known secondary structure (DSSP) TT

TTTS
S






STGGGG

S

SS

BSS


TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DEVTKQRIHDGKEKPGALWHIYAAKDAEKIRELLRKVGEEQGQPDHDPIHDQSWYLDQTLRKRLYEEYGV
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Known secondary structure (DSSP)
TT




GGGTT





T






 .........290.........300.........310.........320.........330..
Sequence QGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEF
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Known secondary structure (DSSP)

TT

TT

SS

GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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