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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4c2mX_

Fold library idPDB HeaderMoleculeTitle
c4c2mX_PDB header: transcriptionChain: X: PDB Molecule: dna-directed rna polymerase i subunit rpa12;PDBTitle: structure of rna polymerase i at 2.8 a resolution


Added to library: Sat Oct 26 08:24:22 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SVVGSLIFCLDCGDLLENPNAVLGSNVECSQCKAIYPKSQFSNLKVVTTTADDAFPSSLRAKKSVVKTSL
Predicted secondary structure












































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Known secondary structure (DSSP)
TTB
SSS

B


GGG
SSS
TTT

STTS









GGGS

TSSS



 .........80.........90.........100.........110.........
Sequence KDGATIKEKCPQCGNEEMNYHTLQLRSADEGATVFYTCTSCGYKFRTNN
Predicted secondary structure



























SS confidence
















































Known secondary structure (DSSP)

S


TTT

S

S
SSS

TTT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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