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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4c2dC_

Fold library idPDB HeaderMoleculeTitle
c4c2dC_PDB header: hydrolase/peptideChain: C: PDB Molecule: carboxy-terminal processing protease ctpb;PDBTitle: crystal structure of the protease ctpb in an active state


Added to library: Sat Dec 7 08:26:27 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SERDKAMDKIEKAYELISNEYVEKVDREKLLEGAIQGMLSTLNDPYSVYMDKQTAKQFSDSLDSSFEGIG
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Known secondary structure (DSSP)
TTSSS


TTT
TT

TSS

 .........80.........90.........100.........110.........120.........130.........140
Sequence AEVGMEDGKIIIVSPFKKSPAEKAGLKPNDEIISINGESMAGKDLNHAVLKIRGKKGSSVSMKIQRPGTK
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Known secondary structure (DSSP) SSS

TT
TTTTTT

TT
TT
TT




TT

TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence KQLSFRIKRAEIPLETVFASEKKVQGHSVGYIAISTFSEHTAEDFAKALRELEKKEIEGLVIDVRGNPGG
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Known secondary structure (DSSP) S




TTS
B
TTTT

S
TT


B
 .........220.........230.........240.........250.........260.........270.........280
Sequence YLQSVEEILKHFVTKDQPYIQIAERNGDKKRYFSTLTHKKAYPVNVITDKGSASASEILAGALKEAGHYD
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Known secondary structure (DSSP)
TTS
TTS
TT








SS

TT

TTS

 .........290.........300.........310.........320.........330.........340.........350
Sequence VVGDTSFGKGTVQQAVPMGDGSNIKLTLYKWLTPNGNWIHKKGIEPTIAIKQPDYFSAGPLQLKEPLKVD
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Known secondary structure (DSSP) S






SSS

TT



TTT



SB




GGGS





SS
B
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence MNNEDVKHAQVLLKGLSFDPGREDGYFSKDMKKAVMAFQDQNKLNKTGVIDTRTAETLNQQIEKKKSDEK
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Known secondary structure (DSSP)

STT





SS


SSST
S


SSB
TTSTT
 .........430...
Sequence NDLQLQTALKSLF
Predicted secondary structure

SS confidence












Known secondary structure (DSSP) T
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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