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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4c1wA_

Fold library idPDB HeaderMoleculeTitle
c4c1wA_PDB header: sugar binding proteinChain: A: PDB Molecule: neuraminidase;PDBTitle: carbohydrate binding domain from streptococcus pneumoniae2 nana sialidase complexed with 3'-sialyllactose


Added to library: Sat Aug 30 08:13:16 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GAMVIEKEDVETNASNGQRVDLSSELDKLKKLENATVHMEFKPDAKAPAFYNLFSVSSATKKDEYFTMAV
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Known secondary structure (DSSP)


GGGTT
GGG
SS
SS

S
SS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence YNNTATLEGRGSDGKQFYNNYNDAPLKVKPGQWNSVTFTVEKPTAELPKGRVRLYVNGVLSRTSLRSGNF
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Known secondary structure (DSSP) TT
TT

BSS


TT
S
B

TTS



SSSTT
TT
S



 .........150.........160.........170.........180........
Sequence IKDMPDVTHVQIGATKRANNTVWGSNLQIRNLTVYNRALTPEEVQKRS
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Known secondary structure (DSSP) GGG
TT

STT



SS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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