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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4c13A_

Fold library idPDB HeaderMoleculeTitle
c4c13A_PDB header: ligaseChain: A: PDB Molecule: udp-n-acetylmuramoyl-l-alanyl-d-glutamate--l-lysinePDBTitle: x-ray crystal structure of staphylococcus aureus mure with2 udp-murnac-ala-glu-lys


Added to library: Sat Oct 5 08:48:27 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MDASTLFKKVKVKRVLGSLEQQIDDITTDSRTAREGSIFVASVGYTVDSHKFCQNVADQGCKLVVVNKEQ
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Known secondary structure (DSSP)
BTT
SS
S


SB

S
GGG

TT

B
SS
BGGGGTT

SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence SLPANVTQVVVPDTLRVASILAHTLYDYPSHQLVTFGVTGTNGKTSIATMIHLIQRKLQKNSAYLGTNGF
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Known secondary structure (DSSP)


TTS
S
TT
GGGSSSSS
TT

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QINETKTKGANTTPETVSLTKKIKEAVDAGAESMTLEVSSHGLVLGRLRGVEFDVAIFSNLTQDHLDFHG
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Known secondary structure (DSSP) TT

S
SS

TT
S

TTTTT


S



S

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence TMEAYGHASLLFSQLGEDLSKEKYVVLNNDDSFSEYLRTVTPYEVFSYGIDEEAQFMAKNIQESLQGVSF
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Known secondary structure (DSSP) S

TT
S
TTS

TTSTTTT

SSSS

STT
 .........290.........300.........310.........320.........330.........340.........350
Sequence DFVTPFGTYPVKSPYVGKFNISNIMAAMIAVWSKGTSLETIIKAVENLEPVEGRLEVLDPSLPIDLIIDY
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Known secondary structure (DSSP) TTSS
STT

TT



TTSS

TTSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence AHTADGMNKLIDAVQPFVKQKLIFLVGMAGERDLTKTPEMGRVACRADYVIFTPDNPANDDPKMLTAELA
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Known secondary structure (DSSP)

SGGG
SS
TTS

TTTTSSS
TTS
 .........430.........440.........450.........460.........470.........480.........
Sequence KGATHQNYIEFDDRAEGIKHAIDIAEPGDTVVLASKGREPYQIMPGHIKVPHRDDLIGLEAAYKKFGGG
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Known secondary structure (DSSP) TT

SS

SS

TT
S
TT

GGG





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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