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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4c0eD_

Fold library idPDB HeaderMoleculeTitle
c4c0eD_PDB header: gene regulationChain: D: PDB Molecule: not1;PDBTitle: structure of the not1 superfamily homology domain from2 chaetomium thermophilum


Added to library: Sat Oct 12 08:29:02 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NLYFQGHXLEAAHLLEQXEYVFDEWIHLCNNPHATERAAXIFVHQLHSVQLVTNRDEFLLFLRHALDKSV
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Known secondary structure (DSSP)




TT


TT

TS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence ERFEQGIHSGASIAESFQAVEALVKLIIIFVKSHQDSEDKPSAAVAFXDSILALGVLVANSHHVKRGENF
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Known secondary structure (DSSP) TT

TTTTTSS








SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence NQRVFYRFFALLLHEVGLLAGHFSKSHYEQIILNFAARLFDXRPNLLPGFACAWAGLVSHRAFLPVILGL
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Known secondary structure (DSSP)
TTTTS
TT
TTT
GGGT
TTTTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PDEKGWAPFTKLLEQFLGCVGELVKTFTVSSLGKEXYHAALKILIVLQHDFPIYLDKFRVQLCQSLPLHA
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Known secondary structure (DSSP) GGGTTTT

S
TTTS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence TQLVNLILAAIPPNCNSLADPFQAGLKVDKIPDXKERPPTAFDSAGLLREAGLLDILERXLQNGPSEDGV
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Known secondary structure (DSSP) T


TT





TTSTT

GGG
GGGG







S



 .........360.........370.........380.........390.........400.........410.........420
Sequence AQINHAINKSGYVPLGVNRRLIDAVVARFAEFAINRASSRSDSAIFVAGANDIKTLQXLVTEVSPEARYY
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Known secondary structure (DSSP)







S
SSS

S

TT
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence LVSSXVNELRYPNAYTNYFSQALLDIFGHDXSDPEENLVREQIVRVLLERVLGYWPQPWGLIITILELLK
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Known secondary structure (DSSP) TT

SSSTTSS
STSSSS


 .........500.........510.......
Sequence NDKYLFFELPFIKATPEVAERFTALAR
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Known secondary structure (DSSP)
TTT
STT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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