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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4bwzA_

Fold library idPDB HeaderMoleculeTitle
c4bwzA_PDB header: transport proteinChain: A: PDB Molecule: na(+)/h(+) antiporter;PDBTitle: crystal structure of the sodium proton antiporter, napa


Added to library: Sat Aug 31 08:52:42 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GAEHLLEIFYLLLAAQVCAFIFKRLNQPVVIGEVLAGVLVGPALLGLVHEGEILEFLAELGAVFLLFMVG
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Known secondary structure (DSSP)
TTT

STTTT

S


 .........80.........90.........100.........110.........120.........130.........140
Sequence LETRLKDILAVGKEAFLVAVLGVALPFLGGYLYGLEIGFETLPALFLGTALVATSVGITARVLQELGVLS
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Known secondary structure (DSSP) T

TTT




TT
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence RPYSRIILGAAVIDDVLGLIVLACVNGVAETGQVEVGAITRLIVLSVVFVGLAVFLSTLIARLPLERLPV
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Known secondary structure (DSSP) STSS

TSTTTS
GGGS

 .........220.........230.........240.........250.........260.........270.........280
Sequence GSPLGFALALGVGMAALAASIGLAPIVGAFLGGMLLSEVREKYRLEEPIFAIESFLAPIFFAMVGVRLEL
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Known secondary structure (DSSP) S
TS
TTTST
T

T
 .........290.........300.........310.........320.........330.........340.........350
Sequence SALASPVVLVAGTVVTVIAILGKVLGGFLGALTQGVRSALTVGCGMAPRGEVGLIVAALGLKAGAVNEEE
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Known secondary structure (DSSP) TSTT
STGGGTT


TT
S
 .........360.........370.........380....
Sequence YAIVLFMVVFTTLFAPFALKPLIAWTERERAAKE
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Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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