Fold library entry viewer: c4bqeA_

Added to library: Sat Feb 22 08:20:40 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	I	S	A	K	A	N	P	E	A	D	D	A	T	E	I	A	G	N	I	V	Y	H	A	K	Y	S	P	H	F	S	P	L	K	F	G	P	E	Q	A	L	Y	A	T	A	E	S	L	R	D	R	L	I	Q	L	W	N	E	T	Y	V	H	F	N	K	V	D	P	K	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T			S															S		S	S		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	Y	Y	L	S	M	E	Y	L	Q	G	R	A	L	T	N	A	I	G	N	L	N	L	Q	G	P	Y	A	D	A	L	R	T	L	G	Y	E	L	E	E	I	A	E	Q	E	K	D	A	A	L	G	N	G	G	L	G	R	L	A	S	C	F	L	D	S	M	A	T	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S					B										T	T												T	T								T	T				B					S																T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	P	A	W	G	Y	G	L	R	Y	R	H	G	L	F	K	Q	I	I	T	K	K	G	Q	E	E	I	P	E	D	W	L	E	K	F	S	P	W	E	I	V	R	H	D	V	V	F	P	V	R	F	F	G	K	V	Q	V	N	P	D	G	S	R	K	W	V	D	G	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S		S							T	T									T	T	S	S			S	S														S							T	T	S						S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	Q	A	L	A	Y	D	V	P	I	P	G	Y	G	T	K	N	T	I	S	L	R	L	W	E	A	K	A	R	A	E	D	L	D	L	F	Q	F	N	E	G	E	Y	E	L	A	A	Q	L	H	S	R	A	Q	Q	I	C	T	V	L	Y	P	G	D	A	T	E	N	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	S	S														G	G	G	S							T	T						T										T	T		S	S				S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	L	R	L	K	Q	Q	F	F	L	C	S	A	S	L	Q	D	I	I	S	R	F	H	E	R	S	T	T	R	K	W	S	E	F	P	S	K	V	A	V	Q	M	N	D	T	H	P	T	L	A	I	P	E	L	M	R	L	L	M	D	D	N	G	L	G	W	D	E	A	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									T						G	G	G											S	S	T	T	T	T											T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	D	V	T	S	K	T	V	A	Y	T	N	H	T	V	L	P	E	A	L	E	K	W	S	Q	S	L	M	W	K	L	L	P	R	H	M	E	I	I	E	E	I	D	K	R	F	V	Q	T	I	R	D	T	R	V	D	L	E	D	K	I	S	S	L	S	I	L	D	N	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S		G	G	G	S																																			G	G	G	G	G	G					S	S					S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Q	K	P	V	V	R	M	A	N	L	C	V	V	S	S	H	T	V	N	G	V	A	Q	L	H	S	D	I	L	K	A	E	L	F	A	D	Y	V	S	I	W	P	N	K	F	Q	N	K	T	N	G	I	T	P	R	R	W	L	R	F	C	S	P	E	L	S	D	I	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S														S					S	S										T	T	T								T	T	T								B		T							T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	W	L	K	T	D	K	W	I	T	D	L	D	L	L	T	G	L	R	Q	F	A	D	N	E	E	L	Q	S	E	W	A	S	A	K	T	A	N	K	K	R	L	A	Q	Y	I	E	R	V	T	G	V	S	I	D	P	T	S	L	F	D	I	Q	V	K	R	I	H	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T		S	G	G	G	S		G	G	G	G	G	G	G	G	G	G	T	T																												S					T	T	S							S				G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	R	Q	L	M	N	I	L	G	V	V	Y	R	F	K	K	L	K	E	M	K	P	E	E	R	K	K	T	V	P	R	T	V	M	I	G	G	K	A	F	A	T	Y	T	N	A	K	R	I	V	K	L	V	N	D	V	G	D	V	V	N	S	D	P	E	V	N	E	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	T																		S						T	T	S													T	T																				T		T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	K	V	V	F	V	P	N	Y	N	V	T	V	A	E	M	L	I	P	G	S	E	L	S	Q	H	I	S	T	A	G	M	E	A	S	G	T	S	N	M	K	F	A	L	N	G	C	L	I	I	G	T	L	D	G	A	N	V	E	I	R	E	E	V	G	E	E	N	F	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S		S												S								T	T	S		S											T	T							S		T											G	G	G	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	F	G	A	T	A	D	Q	V	P	R	L	R	K	E	R	E	D	G	L	F	K	P	D	P	R	F	E	E	A	K	Q	F	V	K	S	G	V	F	G	S	Y	D	Y	G	P	L	L	D	S	L	E	G	N	T	G	F	G	R	G	D	Y	F	L	V	G	Y	D	F	P	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S			T	T	T										T	T																	T	T	T	T		S								G	G	G		S	S	S	S	T	T		S		T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.
Sequence	Y	M	D	A	Q	A	K	V	D	E	A	Y	K	D	R	K	G	W	L	K	M	S	I	L	S	T	A	G	S	G	K	F	S	S	D	R	T	I	A	Q	Y	A	K	E	I	W	N	I	E	A	C	P	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S														T		G	G	G	B												T	T

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PDB structure

FASTA sequence

Hidden Markov model

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