Fold library entry viewer: c4bq3A_

Added to library: Sat Aug 17 08:24:37 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	H	M	L	F	D	F	E	N	D	Q	V	P	S	N	I	H	F	L	N	A	R	A	S	I	E	T	Y	T	G	I	N	G	E	P	S	K	G	L	K	L	A	M	Q	S	K	Q	H	S	Y	T	G	L	A	I	V	P	E	Q	P	W	D	W	S	E	F	T	S	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T					T	T					S											T	T	S	S											T	T	T		S									S	S		B			T	T		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	Y	F	D	I	V	S	V	G	D	H	S	T	Q	F	Y	L	D	V	T	D	Q	N	G	A	V	F	T	R	S	I	D	I	P	V	G	K	M	Q	S	Y	Y	A	K	L	S	G	H	D	L	E	N	D	L	N	L	A	S	G	L	R	S	N	P	P	T	W	T	S	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S												T	T	S											B	S	S									S	S	G	G	G					S		T	T	S		S	S				S	S			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	R	Q	F	V	W	M	W	G	V	K	N	L	D	L	S	G	I	A	K	I	S	L	S	V	Q	S	A	M	H	D	K	T	V	I	I	D	N	I	R	I	Q	P	N	P	P	Q	D	E	N	F	L	V	G	L	V	D	E	F	G	Q	N	A	K	V	D	Y	K	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S										S	S			T	T											S		S	S																			T	T	T	T	S	S		B		T	T	S	S	B	S	S				T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	H	S	L	E	E	L	H	A	A	R	D	V	E	L	A	E	L	D	G	K	P	M	P	S	R	S	K	F	G	G	W	L	A	G	P	K	L	K	A	T	G	Y	F	R	T	E	K	I	N	G	K	W	M	L	V	D	P	E	G	Y	P	Y	F	A	T	G	L	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																	S				T	T	B		T	T	S	S	B	T	T	S							S	S							T	T							T	T	S									S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	R	L	S	N	S	S	T	M	T	G	Y	D	Y	D	Q	A	T	V	A	Q	R	S	A	D	D	V	T	P	E	D	S	K	G	L	M	A	V	S	E	K	S	F	A	T	R	H	L	A	S	P	T	R	A	A	M	F	N	W	L	P	D	Y	D	H	P	L	A	N	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B	S	S	T	T						S					G	G	G	S					T	T		S	S		G	G	G	S												T				S						T	T	B	S					T	T	S	T	T	G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Y	N	Y	R	R	S	A	H	S	G	P	L	K	R	G	E	A	Y	S	F	Y	S	A	N	L	E	R	K	Y	G	E	T	Y	P	G	S	Y	L	D	K	W	R	E	V	T	V	D	R	M	L	N	W	G	F	T	S	L	G	N	W	T	D	P	A	Y	Y	D	N	N	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S			S	S	S	S		S	S																		S	S	T	T																	T	T				B		S	S	B		G	G	G	T	T			S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	P	F	F	A	N	G	W	V	I	G	D	F	K	T	V	S	S	G	A	D	F	W	G	A	M	P	D	V	F	D	P	E	F	K	V	R	A	M	E	T	A	R	V	V	S	E	E	I	K	N	S	P	W	C	V	G	V	F	I	D	N	E	K	S	F	G	R	P	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S										S	S							S	S		S	S	S					T	T	S																			T	T		T	T							S		S			S			S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	S	D	K	A	Q	Y	G	I	P	I	H	T	L	G	R	P	S	E	G	V	P	T	R	Q	A	F	S	K	L	L	K	A	K	Y	K	T	I	A	A	L	N	N	A	W	G	L	K	L	S	S	W	A	E	F	D	L	G	V	D	V	K	A	L	P	V	T	D	T	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					T								T	S		S	T	T																	S									T				S						T	T					T	T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	D	Y	S	M	L	L	S	A	Y	A	D	Q	Y	F	K	V	V	H	G	A	V	E	H	Y	M	P	N	H	L	Y	L	G	A	R	F	P	D	W	G	M	P	M	E	V	V	K	A	A	A	K	Y	A	D	V	V	S	Y	N	S	Y	K	E	G	L	P	K	Q	K	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																											T	T	S							B		T	T	S														S	S							S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	A	F	L	A	E	L	D	K	P	S	I	I	G	E	F	H	I	G	A	M	D	H	G	S	Y	H	P	G	L	I	H	A	A	S	Q	A	D	R	G	E	M	Y	K	D	Y	M	Q	S	V	I	D	N	P	Y	F	V	G	A	H	W	F	Q	Y	M	D	S	P	L	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T					T											B		S	S	S	S		S	B			S	S	B		S	S																			T	T							S		S	B				T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740
Sequence	R	A	Y	D	G	E	N	Y	N	V	G	F	V	D	V	T	D	T	P	Y	Q	E	M	V	D	A	A	K	E	V	N	A	K	I	Y	T	E	R	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T				B				S	B		T	T	S		B													T	T

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PDB structure

FASTA sequence

Hidden Markov model

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