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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4bopA_

Fold library idPDB HeaderMoleculeTitle
c4bopA_PDB header: hydrolaseChain: A: PDB Molecule: otu domain-containing protein 1;PDBTitle: structure of otud1 otu domain


Added to library: Sat Jul 20 08:41:42 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KLALYLAEVEKQDKYLRQRNKYRFHIIPDGNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLI
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Known secondary structure (DSSP)
TT




STTS
GGGTGGGS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EGDVGEFIIAAAQDGAWAGYPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYLGPEDSLRPSIWLSWLS
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Known secondary structure (DSSP)
S
TSTT



T
TT
SSS


SS
T
 .........
Sequence NGHYDAVFD
Predicted secondary structure





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Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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