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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4bojC_

Fold library idPDB HeaderMoleculeTitle
c4bojC_PDB header: hydrolaseChain: C: PDB Molecule: alpha-1,6-mannanase;PDBTitle: crystal structure of bacillus circulans tn-31 aman6 in2 complex with mannobiose


Added to library: Sat May 31 08:17:16 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PLGAYTASDGDTAMKAFNDTFWDPNAKMFWKDSKREKHQDAWVEAELWELVMDAYQHTSDPALKAELKTQ
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Known secondary structure (DSSP)

SSS
TTTTBSBTT

SB




 .........80.........90.........100.........110.........120.........130.........140
Sequence IDDVYDGTVAKYGQDWTNNPFNDDIMWWAMGSARAYQITGNPRYLEAARDHFDFVYDTQWDEEFANGGIW
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Known secondary structure (DSSP)
S

TT
SB

B
STTTTS
BB
 .........150.........160.........170.........180.........190.........200.........210
Sequence WLNSDHNTKNACINFPAAQAALYLYDITKDEHYLNAATKIFRWGKTMLTDGNGKVFDRIEIEHGAVPDAT
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Known secondary structure (DSSP) SBSS




SB
SSS
B

TTT



 .........220.........230.........240.........250.........260.........270.........280
Sequence HYNQGTYIGSAVGLYKATGNAVYLDDAVKAAKFTKNHLVDSNGVLNYEGPNGDLKGGKTILMRNLAHLQK
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Known secondary structure (DSSP)

SB
TTS
B



SSTTTTT
 .........290.........300.........310.........320.........330.........340....
Sequence TLDETGQYPEFSAEFDEWLAFNIEMAWSHRNSDHIVDGNWAGQLLSGTYESWSSAAAVQALNGI
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Known secondary structure (DSSP)

ST

TTS


S
TTS


SS

BTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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