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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4bmvH_

Fold library idPDB HeaderMoleculeTitle
c4bmvH_PDB header: oxidoreductaseChain: H: PDB Molecule: short-chain dehydrogenase;PDBTitle: short-chain dehydrogenase from sphingobium yanoikuyae in2 complex with nadph


Added to library: Sat Mar 22 08:40:59 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LPTVLITGASSGIGATYAERFARRGHDLVLVARDKVRLDALAARLRDESGVAVEALQADLTRPADLAAVE
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Known secondary structure (DSSP)

S
SSTT

S





TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence IRLREDARIGILINNAGMAQSGGFVQQTAEGIERLITLNTTALTRLAAAVAPRFVQSGTGAIVNIGSVVG
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Known secondary structure (DSSP)
TT






S
GGG

TT



GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence FAPEFGMSIYGATKAFVLFLSQGLNLELSPSGIYVQAVLPAATRTEIWGRAGIDVNTLPEVMEVDELVDA
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Known secondary structure (DSSP) G
GGGS
GGGT



SBSSTTT

GGGSS

B
 .........220.........230.........240.........250......
Sequence ALVGFDRRELVTIPPLHVAARWDALDGARQGLMSDIRQAQAADRYR
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Known secondary structure (DSSP) TT
S
TT
S
TT


SS

TT
-


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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