PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4bm5A_

Fold library id	PDB Header	Molecule	Title
c4bm5A_	PDB header: protein transport	Chain: A: PDB Molecule: similar to chloroplast inner membrane protein tic110;	PDBTitle: chloroplast inner membrane protein tic110

Links to external resources
Added to library: Sat Jun 15 08:29:00 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S N L I D F Y I R N G I L E M E N E Q A V Y P V N L R G V L N I L Q E M Y R Q Y L I Q S F A A K S R T E K E R L F N N L A H L G N I L G V N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
S
S S
T T
G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A I H S N I G S V I Y K T Y A S Q A L T N N R L E E K D I E F L R N I Q N M L S M D E A T C R T L L Q E T K E A R A G F L F D K I F M A E A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G T T T T
T T S S
G G G G G G S
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V A E F R R V C R E L D V E D R R V R A F R A E I E H A I E N S L L K E S Q E E L G I S A E K A R Q V L L D C I Q D R C E A L I V Q A A A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S
T T T S S S S T T T S
S S
T T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . .

Sequence L R Q R R Q E G A A R D L S R A L R Q E L Y L V Y Q A Y A L G T A R S N A E N D Q V K E D L A L L R E M L G I Q A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S S S
S S T T T S
T T T G G G T
S S
T T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	N	L	I	D	F	Y	I	R	N	G	I	L	E	M	E	N	E	Q	A	V	Y	P	V	N	L	R	G	V	L	N	I	L	Q	E	M	Y	R	Q	Y	L	I	Q	S	F	A	A	K	S	R	T	E	K	E	R	L	F	N	N	L	A	H	L	G	N	I	L	G	V	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T							S																														S	S				T	T																			G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	I	H	S	N	I	G	S	V	I	Y	K	T	Y	A	S	Q	A	L	T	N	N	R	L	E	E	K	D	I	E	F	L	R	N	I	Q	N	M	L	S	M	D	E	A	T	C	R	T	L	L	Q	E	T	K	E	A	R	A	G	F	L	F	D	K	I	F	M	A	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G																	T	T	T	T			T	T												S	S				G	G	G															G	G	G	S					T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	A	E	F	R	R	V	C	R	E	L	D	V	E	D	R	R	V	R	A	F	R	A	E	I	E	H	A	I	E	N	S	L	L	K	E	S	Q	E	E	L	G	I	S	A	E	K	A	R	Q	V	L	L	D	C	I	Q	D	R	C	E	A	L	I	V	Q	A	A	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T	S																						T	T	T	S					S	S	S	T	T	T	S		S	S		T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Sequence	L	R	Q	R	R	Q	E	G	A	A	R	D	L	S	R	A	L	R	Q	E	L	Y	L	V	Y	Q	A	Y	A	L	G	T	A	R	S	N	A	E	N	D	Q	V	K	E	D	L	A	L	L	R	E	M	L	G	I	Q	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	S	S	S		S	S					T	T	T	S				T	T	T	G	G	G									T		S	S											T					T	T	T	T