| 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence |
A | M | N | L | I | P | E | D | G | L | P | P | I | L | I | S | T | Y | A | V | E | E | K | P | S | Q | I | S | V | M | Q | Q | L | E | D | P | D | P | L | V | F | V | L | N | A | N | L | L | S | M | V | K | I | V | N | Y | V | N | R | K | C | W | C | F | T | T | K | G | M | H |
Predicted secondary structure |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|  |  |  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
|
|
|
|
|
| S | S | S |
|
|
|  |  |  |
|
|
|  |  |  | S | S |
|
|  |  |  |  |  |  |  |  | T |
|
|
|
|  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | S | S | G |
  | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence |
A | V | G | Q | S | E | I | V | I | L | L | Q | C | L | P | D | E | K | C | L | P | K | D | I | F | N | H | F | V | Q | L | Y | R | D | A | L | A | G | N | V | V | S | N | L | G | H | S | F | F | S | Q | S | F | L | G | S | K | E | H | G | G | F | L | Y | V | T | S | T | Y | Q |
Predicted secondary structure |
 |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
G | G | T |
|
|  |  |  |  |  |  |  |
|
| T | T |
|
| S |
|
| T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
| T | T |
|  |  |  |
| S | S |
| B | T | T | B | T | T |  |  |  |  |  |  |  |
|
| S | S | S |
  | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence |
S | L | Q | D | L | V | L | P | T | P | P | Y | L | F | G | I | L | I | Q | K | W | E | T | P | W | A | K | V | F | P | I | R | L | M | L | R | L | G | A | E | Y | R | L | Y | P | C | P | L | F | S | V | R | F | R | K | P | L | F | G | E | T | G | H | T | I | M | N | L | L | A |
Predicted secondary structure |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
|
| T | T |
|
|
|
| S | S | S |  |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | S |
|
| S |  |  |
| T | T |
|
|
| S |
|
|
|
| T | T |
| G | G | G | G | T | S |
  | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
Sequence |
D | F | R | N | Y | Q | Y | T | L | P | V | V | Q | G | L | V | V | D | M | E | V | R | K | T | S | I | K | I | P | S | N | R | Y | N | E | M | M | K | A | M | N | K | S | N | E | H | V | L | A | G | G | A | C | F | N | E | K | A | D | S | H | L | V | C | V | Q | N | D | D | G |
Predicted secondary structure |
 |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
| S | S | S |
|
|
|
|
|
| B |
| T | T |
|  |  |  |  |  | T | T |  |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  | T | S |
| S | S |  |  |  |  |  |
|
|
|
| T | T |
| S |  |  |  |  |  |  |  |
| T | T | S |
  | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 |
Sequence |
N | Y | Q | T | Q | A | I | S | I | H | N | Q | P | R | K | V | T | G | A | S | F | F | V | F | S | G | A | L | A | K | S | S | I | V | E | D | G | V | M | V | Q | I | T | A | E | N | M | D | S | L | R | Q | A | L | R | E | M | K | D | F | T | I | E | H | I | H | I | Q | W | V |
Predicted secondary structure |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
|  |  |  |  |  |  |  | S | S | S |
|
|
| S | S |  |  |
| S |  |  |  |  |  | S |
|
|
|  |  |  |  |  | T | T |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |
|
|  |  |  |  |  |  |  |
  | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 |
Sequence |
D | D | D | K | N | V | S | K | G | V | V | S | P | I | D | G | K | S | M | E | T | I | T | N | V | K | I | F | H | E | Y | K | A | N | G | K | V | I | R | W | T | E | V | F | F | L | E | S | R | L | T | E | H | V | A | K | A | F | C | L | A | L | C | P | H | L | K | L | L | K |
Predicted secondary structure |
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
S |
|
|
|
| S |
| T | T |
| B |
| T | T | T |
|
| B |
| T | T | S |  |  |  |  |
|
|
|
|  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |  |  |  |  |  |
  | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . |
Sequence |
E | D | G | M | T | K | L | G | L | R | V | T | L | D | S | D | Q | V | G | Y | Q | A | G | S | N | G | Q | P | L | P | S | Q | Y | M | N | D | L | D | S | A | L | V | P | V | I | H | V | V | M | E | L | I | F | Y | I | L | E | N | I |
Predicted secondary structure |
 |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
 | T | T |
|
|  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  | T | T | B |
|
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|