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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4bj5A_

Fold library idPDB HeaderMoleculeTitle
c4bj5A_PDB header: transcriptionChain: A: PDB Molecule: protein rif2;PDBTitle: crystal structure of rif2 in complex with the c-terminal2 domain of rap1 (rap1-rct)


Added to library: Sat Jun 22 08:25:42 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PVKERVDHVFYQKFKSMALQELGTNYLSISYVPSLSKFLSKNLRSMKNCIVFFDKVEHIHQYAGIDRAVS
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Known secondary structure (DSSP)


GGG


TT
TSSSS



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence ETLSLVDINVVIIEMNDYLMKSDLMMMVMRKINNDESIDHIVYFKFEQLDKLSTSTIIEPSKLTEFINVL
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Known secondary structure (DSSP)

S
B



TTT
SS

SSS
S

B
 .........150.........160.........170.........180.........190.........200.........210
Sequence SVLEKSNNIAFKVLIYSNNVSISSLLSTSLKKKLNTKYTVFEMPILTCAQEQEYLKKMIKFTFDSGSKLL
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Known secondary structure (DSSP)
TTS
TT
SS





T


SSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence QSYNSLVTCQLNNKESNLAIFFEFLKVFPHPFTYLFNAYTEIIVQSRTFDELLDKIRNRLTIKNYPHSAY
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Known secondary structure (DSSP) STTSTT
SS
SST

TTTS
GGGS
 .........290..
Sequence NFKKNQRLPLKL
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Known secondary structure (DSSP)


TT







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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