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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4binA_

Fold library idPDB HeaderMoleculeTitle
c4binA_PDB header: hydrolaseChain: A: PDB Molecule: n-acetylmuramoyl-l-alanine amidase amic;PDBTitle: crystal structure of the e. coli n-acetylmuramoyl-l-alanine amidase2 amic


Added to library: Sat Aug 24 08:38:09 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FQGHMQVVAVRVWPASSYTRVTVESNRQLKYKQFALSNPERVVVDIEDVNLNSVLKGMAAQIRADDPFIK
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Known secondary structure (DSSP)

TT
S

SS
SS

TTTTS



GGGGG

TT
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SARVGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPAPLLALLEDYNSGPQPGKAGRDRPI
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Known secondary structure (DSSP) TTSS

SBTTB



T



S
SS
BTTTB
 .........150.........160.........170.........180.........190.........200.........210
Sequence VIMLDPGHGGEDSGAVGKYKTREKDVVLQIARRLRSLIEKEGNMKVYMTRNEDIFIPLQVRVAKAQKQRA
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Known secondary structure (DSSP)

BTTB

SB
TT

BTT
TTS
SSS



TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DLFVSIHADAFTSRQPSGSSVFALSTKGATSTAAKYLAQTQNASDLIGGVSDMVQSLTIADSLKFGKAVL
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Known secondary structure (DSSP) S



SSS


SB
SS

SST




 .........290.........300.........310.........320.........330.........340........
Sequence NKLGKINKLHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTATFQQEVAESILAGIKAYFA
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Known secondary structure (DSSP) TTTS
BSSSS


GGG

TTS



TTSTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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