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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4bijD_

Fold library idPDB HeaderMoleculeTitle
c4bijD_PDB header: hydrolaseChain: D: PDB Molecule: dna maturase b;PDBTitle: threading model of t7 large terminase


Added to library: Sat May 11 08:25:24 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSTQSNRNALVVAQLKGDFVAFLFVLWKALNLPVPTKCQIDMAKVLANGDNKKFILQAFRGIGKSFITCA
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Known secondary structure (DSSP)
T
T



BTTTBS





SSSSS
S

SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FVVWSLWRDPQLKILIVSASKERADANSIFIKNIIDLLPFLSELKPRPGQRDSVISFDVGPANPDHSPSV
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Known secondary structure (DSSP) TSSS


SSTTTS
TTT



S
BSTTS
S
BS
SSSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence KSVGITGQLTGSRADIIIADDVEIPSNSATMGAREKLWTLVQEFAALLKPLPSSRVIYLGTPQTEMTLYK
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Known secondary structure (DSSP) TTTTT
SSTTTS
TTSSSTT







TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ELEDNRGYTTIIWPALYPRTREENLYYSQRLAMLRAEYDENPEALAGTPTDPVRFDRDDLRERELEYGKA
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Known secondary structure (DSSP) TT






STTSGGGGB
TTS
B


TTS
TTTTT


TTS
SBSS
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence GFTLQFMLNPNLSDAEKYPLRLRDAIVAALDLEKAMHYQWLPNRQNIIEDLPNVGLKGDDLHTYHDCSNN
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Known secondary structure (DSSP) T








SSSSS


TT

B







SSSSS


SSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence SGQYQQKILVIDPSGRGKDETGYAVLYTLNGYIYLMEAGGFRDGYSDKTLELLAKKAKQWGVQTVVYESN
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Known secondary structure (DSSP) TTS

STSSSSSS

S

SSSS
SS

ST
 .........430.........440.........450.........460.........470....
Sequence FGDGMFGKVFSPILLKHHNCAMEEIRARGMKEMRICDTLEPVMQTHRLVIRDEV
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Known secondary structure (DSSP) TTS


STSTT
TT


SGGGTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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