PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4bhhZ_

Fold library id	PDB Header	Molecule	Title
c4bhhZ_	PDB header: viral protein/rna	Chain: Z: PDB Molecule: nucleoprotein;	PDBTitle: crystal structure of tetramer of la crosse virus nucleoprotein in2 complex with ssrna

Links to external resources
Added to library: Sat Apr 27 08:20:35 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L V F Y D G F D P D A G Y M D F C V K N A E S L N L A A V R I F F L N A A K A K A A L S R K P E R K A N P K F G E W Q V E V I N N H F P G N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
T T
S G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R N N P I G N N D L T I H R L S G Y L A R W V L D Q Y N E N D D E S Q H E L I R T T I I N P I A E S N G V G W D S G P E I Y L S F F P G T E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G
T T
T
T T T
G G G
T T S T T G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence M F L E T F K F Y P L T I G I H R V K Q G M M D P Q Y L K K A L R Q R Y G T L T A D K W M S Q K V A A I A K S L K D V E Q L K W G K G G L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G T T T T T T T T S S
G G G G S
S S S
T S
S T T S S

. . . . . . . . . 220 . . .

Sequence D T A K T F L Q K F G I R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	V	F	Y	D	G	F	D	P	D	A	G	Y	M	D	F	C	V	K	N	A	E	S	L	N	L	A	A	V	R	I	F	F	L	N	A	A	K	A	K	A	A	L	S	R	K	P	E	R	K	A	N	P	K	F	G	E	W	Q	V	E	V	I	N	N	H	F	P	G	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T																									S	S							T	T										S	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	N	N	P	I	G	N	N	D	L	T	I	H	R	L	S	G	Y	L	A	R	W	V	L	D	Q	Y	N	E	N	D	D	E	S	Q	H	E	L	I	R	T	T	I	I	N	P	I	A	E	S	N	G	V	G	W	D	S	G	P	E	I	Y	L	S	F	F	P	G	T	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G					T	T																					T																					T	T	T			G	G	G							T	T	S	T	T	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	M	F	L	E	T	F	K	F	Y	P	L	T	I	G	I	H	R	V	K	Q	G	M	M	D	P	Q	Y	L	K	K	A	L	R	Q	R	Y	G	T	L	T	A	D	K	W	M	S	Q	K	V	A	A	I	A	K	S	L	K	D	V	E	Q	L	K	W	G	K	G	G	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	T	T	T	T	T	T												T	T	S	S		G	G	G	G						S		S	S	S																							T	S			S	T	T	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.
Sequence	D	T	A	K	T	F	L	Q	K	F	G	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	S