Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4bgvB_

Fold library idPDB HeaderMoleculeTitle
c4bgvB_PDB header: oxidoreductaseChain: B: PDB Molecule: malate dehydrogenase;PDBTitle: 1.8 a resolution structure of the malate dehydrogenase from2 picrophilus torridus in its apo form


Added to library: Sat Apr 19 22:48:06 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ARSKISVIGAGAVGATVAQTLAIRQTGDIYIFDIVDGLAEGKALDILEGAPHWGYDLDIKGFCTADESKY
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)




STT
SSSTTTT




TTSGGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence AEMKGSDVIVVTAGLARKPGMSRDDLLLKNIGIMKSVGEAIKKYSPESKIVVVTNPADIMAYAIYKASGI
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) GGGTT
S






TT


TT

SSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence SPERIIGLGGSLDSTRFRTFLAQELNVSFEDVNAFVIGGHGDDMVPFIRYSNVSGIPIEDLLPREKIDEI
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP)
GGG
ST

GGG


SGGG
GGG
TTGGGTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VKRTRFGGGEIVNLYKTGSAFYAPGISIAVMVESIVNDRKRVIPCAAYITGEHSKTYLVNNLFIGVPIKI
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) TSSS


TT


TTS
SS
 .........290.........300.........310.........320...
Sequence GKNGVEKIYDLKFNEDELEAWKKSVESVKKNSAIADDYFAKNQ
Predicted secondary structure













SS confidence










































Known secondary structure (DSSP) TT








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D