PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4bgoA_

Fold library id	PDB Header	Molecule	Title
c4bgoA_	PDB header: hydrolase	Chain: A: PDB Molecule: efem m75 peptidase;	PDBTitle: structural and functional role of the imelysin-like protein2 efem from pseudomonas syringae pv. syringae and3 implications in bacterial iron transport

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Added to library: Sat Apr 13 08:23:43 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A T A P L D L V G P V S D Y K I Y V T E N I E E L V S H T Q K F T D A V K K G D I A T A K K L Y A P T R V Y Y E S V E P I A E L F S D L D A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G G T T
T T T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S I D S R V D D H E Q G V A A E D F T G F H R L E Y A L F S Q N T T K D Q G P I A D K L L S D V K D L E K R V A D L T F P P E K V V G G A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T T G G G
T T
T S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A L L E E V A A T K I S G E E D R Y S H T D L Y D F Q G N I D G A K K I V D L F R P Q I E Q Q D K A F S S K V D K N F A T V D K I L A K Y K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
S
T T T
T
T T T T B

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 .

Sequence T K D G G F E T Y D K V K E N D R K A L V G P V N T L A E D L S T L R G K L G L N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
B
G G G S
T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	T	A	P	L	D	L	V	G	P	V	S	D	Y	K	I	Y	V	T	E	N	I	E	E	L	V	S	H	T	Q	K	F	T	D	A	V	K	K	G	D	I	A	T	A	K	K	L	Y	A	P	T	R	V	Y	Y	E	S	V	E	P	I	A	E	L	F	S	D	L	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	G																															T	T																		T	T					T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	I	D	S	R	V	D	D	H	E	Q	G	V	A	A	E	D	F	T	G	F	H	R	L	E	Y	A	L	F	S	Q	N	T	T	K	D	Q	G	P	I	A	D	K	L	L	S	D	V	K	D	L	E	K	R	V	A	D	L	T	F	P	P	E	K	V	V	G	G	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G		T	T	G	G	G		T	T													T	S				T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	L	L	E	E	V	A	A	T	K	I	S	G	E	E	D	R	Y	S	H	T	D	L	Y	D	F	Q	G	N	I	D	G	A	K	K	I	V	D	L	F	R	P	Q	I	E	Q	Q	D	K	A	F	S	S	K	V	D	K	N	F	A	T	V	D	K	I	L	A	K	Y	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	T	T		S		T	T	T																					T									T	T																		T	T	B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Sequence	T	K	D	G	G	F	E	T	Y	D	K	V	K	E	N	D	R	K	A	L	V	G	P	V	N	T	L	A	E	D	L	S	T	L	R	G	K	L	G	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S		B			G	G	G	S																				T	T					T	T