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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4bgaB_

Fold library idPDB HeaderMoleculeTitle
c4bgaB_PDB header: transferaseChain: B: PDB Molecule: predicted molecular chaperone distantly related toPDBTitle: nucleotide-bound open form of a putative sugar kinase2 mk0840 from methanopyrus kandleri


Added to library: Sat Nov 30 08:26:25 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LTRVLGIQLGNTGTDYCVMNEDGDWEIVAREEGVFGKISCVFTLEESRRALREEIAPRVIERVRRVNPDL
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Known secondary structure (DSSP)


SSTT



BTTB
SSS
T

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence AVVGTIVDELGLILGPMIHEKTGVPTLAVYGDPWGAPDGDAVGAPYCVAEEYPNCVHVDVGAMAVVTPIR
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Known secondary structure (DSSP) SS



S
TTSS

GGGT
SSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence DGRPDFGDAVVSVGTFPLDLAARELLGKEYDEGGKKAAEGEVDENFRRELRSVDVDGKPVFGRVRGSLAP
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Known secondary structure (DSSP) TT
TTT

SSSSS
GGGTTGGGS


T
TTSSSS
STTB

 .........220.........230.........240.........250.........260.........270.........280
Sequence VPPEQERVLRDHIRDAGAPAEDVLRTLVELVAETIVINAAQYDMDLLVLSGGGVKNELLKRRVSELWEGD
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Known secondary structure (DSSP)


S
GGG

SSGGGGS
SS
 .........290.........300.........310....
Sequence VSIFAGEELEARGLCLLGLRYLEGEPVPALPCEG
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Known secondary structure (DSSP)


S
TT


S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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