Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4bf5A_

Fold library idPDB HeaderMoleculeTitle
c4bf5A_PDB header: isomeraseChain: A: PDB Molecule: alanine racemase;PDBTitle: structure of broad spectrum racemase from aeromonas hydrophila


Added to library: Sat Jan 18 08:49:22 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence APYLPLASDHRNGEVQTASNAWLEVDLGAFEHNIQTLKDRLGDKGPKICAIMKADAYGHGIDLLVPSVVK
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP)





TT


TB
SSS

S
TTS

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence AGIPCIGIASNEEARVAREKGFTGRLMRVRAATPAEVEQALPYKMEELIGSLVSAQGIADIAQRHHTNIP
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) T

SSTT

SSS


TGGGT
B
STT

 .........150.........160.........170.........180.........190.........200.........210
Sequence VHIALNSAGMSRNGIDLRLADSKEDALAMLKLKGITPVGIMTHFPVEEKEDVKMGLAQFKLDSQWLLEAG
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) B
TT


SS
B
TTST
TT


SS

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence KLDRSKITIHAANSFATLEVPDAYFDMVRPGGLLYGDSIPSYTEYKRVMAFKTQVASVNHYPAGNTVGYD
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP) T

GGG




GGG
SS

ST
S
TT
TTS





TT
TGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence RTFTLKRDSWLANLPLGYSDGYRRALSNKAYVLIQGQKVPVVGKTSMNTIMVDVTDLKGVKPGDEVVLFG
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP) G

SS
S

GGGT


S

SS
TTS


SS

TTSSS

TT
 .........360.........370.........380.........390......
Sequence RQGEAEVKQADLEEYNGALLADMYTIWGYTNPKKIKRSSGHHHHHH
Predicted secondary structure
































SS confidence













































Known secondary structure (DSSP) TT
TS
TS




S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D