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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4be3A_

Fold library idPDB HeaderMoleculeTitle
c4be3A_PDB header: lyaseChain: A: PDB Molecule: alginate lyase, family pl7;PDBTitle: crystal structure of the exolytic pl7 alginate lyase alya52 from zobellia galactanivorans


Added to library: Sat Jun 29 08:23:20 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TKYPSELIPQMDEWKILLGDGTHKEDLVNYAKDDFFYVEHENETDWVVFKTPNSGITSRTSSNTRTELGQ
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Known secondary structure (DSSP)


GGGT
TTGGG
TTS
S

TT

BTTTTTSSS


TT
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KKHWIPETGGKLNATLKVQHVSTSGDARVAASYSVVVGQIHSDEGHENEPIKIFYKKFPGHTKGSVFWNY
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Known secondary structure (DSSP) SS
B
TTT


S
S
TTSTTTTSSTT


S

TT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence EINTKGDNSKRWDYSTAVWGYDMSVVGPTATSYPEEPEDGIALGEEFSYEINVYEGIMYLTFSSEGHKTI
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Known secondary structure (DSSP)

BSS
GGG

S

TT


SBTTB




TT
TT

TT
TTS

 .........220.........230.........240.........250.........260.........270.........280
Sequence KFTKNLLKSNFTKKSDIPQQIKTLYASIGRDGIERENAYAGEIQYFKLGAYNQTNGKSPEDNLVWSTGAD
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Known secondary structure (DSSP) SSS
S
SSGGGS
TTTT




B
TTTTTT







GGG
TTT




 .........290.........300.........310..
Sequence VYDGDIAKQYANGSYAEVWFKEATLGSGSAPE
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Known secondary structure (DSSP)
GGG
TT







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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