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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4bbwA_

Fold library idPDB HeaderMoleculeTitle
c4bbwA_PDB header: hydrolaseChain: A: PDB Molecule: sialidase (neuraminidase);PDBTitle: the crystal structure of sialidase vpi 5482 (btsa) from2 bacteroides thetaiotaomicron


Added to library: Sat Aug 17 08:23:44 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TVFVHQTQIPILIERQDNVLFYFRLDAKESRXXDEIVLDFGKSVNLSDVQAVKLYYGGTEALQDKGKKRF
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Known secondary structure (DSSP)



S
TT
S


SS


TT
BSGGG




GGGGGG

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence APVDYISSHRPGNTLAAIPSYSIKCAEALQPSAKVVLKSHYKLFPGINFFWISLQXKPETSLFTKISSEL
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Known secondary structure (DSSP)
SS
SS
SSSTT

SS

GGG
S

S

SS
TT

TT


 .........150.........160.........170.........180.........190.........200.........210
Sequence QSVKIDGKEAICEERSPKDIIHRXAVGVRHAGDDGSASFRIPGLVTSNKGTLLGVYDVRYNSSVDLQEYV
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Known secondary structure (DSSP) TT



S
SS


TTGGG
S



TT

SS
S

SSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DVGLSRSTDGGKTWEKXRLPLSFGEYDGLPAAQNGVGDPSILVDTQTNTIWVVAAWTHGXGNQRAWWSSH
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Known secondary structure (DSSP) SSTTSS





TTGGG

GGGS
TTTT



TTS


 .........290.........300.........310.........320.........330.........340.........350
Sequence PGXDLYQTAQLVXAKSTDDGKTWSKPINITEQVKDPSWYFLLQGPGRGITXSDGTLVFPTQFIDSTRVPN
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Known secondary structure (DSSP) SSSSTTTS
SSTTSS






TT
S
S

TTS

TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence AGIXYSKDRGKTWKXHNXARTNTTEAQVVETEPGVLXLNXRDNRGGSRAVAITKDLGKTWTEHPSSRKAL
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Known secondary structure (DSSP) SSTTSS



SSTTSSSSB
SSTTSS

TTTTTSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence QEPVCXASLIHVEAEDNVLDKDILLFSNPNTTRGRNHITIKASLDDGLTWLPEHQLXLDEGEGWGYSCLT
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Known secondary structure (DSSP) B
SS



GGGSTT
S
SSSSSS

SSTTS


GGG
S




 .........500.........510.........520
Sequence XIDRETIGILYESSAAHXTFQAVKLKDLIR
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Known secondary structure (DSSP) SSSS

SS
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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