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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c4bbqA_ | PDB header: oxidoreductase | Chain: A: PDB Molecule: lysine-specific demethylase 2a; | PDBTitle: crystal structure of the cxxc and phd domain of human2 lysine-specific demethylase 2a (kdm2a)(fbxl11) |
Added to library: Sat Oct 20 17:07:56 2012 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | M | R | R | V | R | C | R | K | C | K | A | C | V | Q | G | E | C | G | V | C | H | Y | C | R | D | M | K | K | F | G | G | P | G | R | M | K | Q | S | C | V | L | R | Q | C | L | A | P | R | L | P | H | S | V | T | C | S | L | C | G | E | V | D | Q | N | E | E | T | Q | D | F |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | S | S | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | S | G | G | G | T | S | S | G | G | G | S | S | B | T | T | B | T | T | T | B | ![]() | ![]() | ![]() | ![]() | G |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
Sequence | E | K | K | L | M | E | C | C | I | C | N | E | I | V | H | P | G | C | L | Q | M | D | G | E | G | L | L | N | E | E | L | P | N | C | W | E | C | P | K | C | Y | |||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | G | G | S | ![]() | ![]() | ![]() | T | T | T | ![]() | ![]() | G | G | G | S | ![]() | ![]() | S | S | S | S | S | ![]() | ![]() | ![]() | T | T | T |
Download: | PDB structure | FASTA sequence |
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