Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4b9wB_

Fold library idPDB HeaderMoleculeTitle
c4b9wB_PDB header: replicationChain: B: PDB Molecule: tudor domain-containing protein 1;PDBTitle: structure of extended tudor domain td3 from mouse tdrd1 in2 complex with mili peptide containing dimethylarginine 45.


Added to library: Sat Oct 20 16:14:57 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LEWTWVEFTVDETVDVVVCMMYSPGEFYCHFLKDDALEKLDDLNQSLADYCAQFKAEIGRPCCAFFSGDG
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)



B



TT
TT

TTT




TT
TTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence NWYRALVKEILPSGNVKVHFVDYGNVEEVTTDQLQAILPQFLLLPFQGMQCWLVDIQPPNKHWTKEATAR
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)
TTS
TTT


GGG


GGGGSS
B

TT
SSSS

 .........150.........160.........170.........180.........190.
Sequence FQACVVGLKLQARVVEITANGVGVELTDLSTPYPKIISDVLIREQLVLRCG
Predicted secondary structure
















SS confidence


















































Known secondary structure (DSSP) TT


SS

SSSS
TTSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D